Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Gm6222-201ENSMUST00000120787 396 ntBASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Gm15321-201ENSMUST00000121290 288 ntBASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Gm7653-201ENSMUST00000214567 508 ntBASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Gm27631-201ENSMUST00000184163 466 ntBASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Gm29667-201ENSMUST00000190817 490 ntBASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Khdc4Q3TCX3 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Khdc4Q3TCX3 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Khdc4Q3TCX3 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.37□□□□□ -0.27
Khdc4Q3TCX3 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Khdc4Q3TCX3 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.37□□□□□ -0.27
Khdc4Q3TCX3 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Khdc4Q3TCX3 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Khdc4Q3TCX3 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Khdc4Q3TCX3 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Khdc4Q3TCX3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Khdc4Q3TCX3 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms