Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.44□□□□□ -0.42
Chd8Q09XV5 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.44□□□□□ -0.42
Chd8Q09XV5 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Chd8Q09XV5 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd8Q09XV5 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Chd8Q09XV5 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.43□□□□□ -0.42
Chd8Q09XV5 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Chd8Q09XV5 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
Chd8Q09XV5 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chd8Q09XV5 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Chd8Q09XV5 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd8Q09XV5 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd8Q09XV5 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.43□□□□□ -0.42
Chd8Q09XV5 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd8Q09XV5 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd8Q09XV5 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd8Q09XV5 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd8Q09XV5 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.43□□□□□ -0.42
Chd8Q09XV5 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.43□□□□□ -0.42
Chd8Q09XV5 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.43□□□□□ -0.42
Chd8Q09XV5 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd8Q09XV5 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Chd8Q09XV5 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd8Q09XV5 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chd8Q09XV5 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chd8Q09XV5 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.42□□□□□ -0.42
Chd8Q09XV5 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.42□□□□□ -0.42
Chd8Q09XV5 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.42□□□□□ -0.42
Chd8Q09XV5 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd8Q09XV5 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC12.42□□□□□ -0.42
Chd8Q09XV5 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.42□□□□□ -0.42
Chd8Q09XV5 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chd8Q09XV5 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.41□□□□□ -0.42
Chd8Q09XV5 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.41□□□□□ -0.42
Chd8Q09XV5 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Chd8Q09XV5 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd8Q09XV5 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Chd8Q09XV5 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.41□□□□□ -0.42
Chd8Q09XV5 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd8Q09XV5 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd8Q09XV5 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd8Q09XV5 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd8Q09XV5 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd8Q09XV5 Gm43702-201ENSMUST00000198772 2546 ntBASIC12.41□□□□□ -0.42
Chd8Q09XV5 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd8Q09XV5 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd8Q09XV5 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd8Q09XV5 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd8Q09XV5 Gm11980-201ENSMUST00000121445 986 ntBASIC12.41□□□□□ -0.42
Chd8Q09XV5 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.41□□□□□ -0.42
Chd8Q09XV5 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.41□□□□□ -0.42
Chd8Q09XV5 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Chd8Q09XV5 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms