Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf1Q07802 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ebf1Q07802 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf1Q07802 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ebf1Q07802 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf1Q07802 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf1Q07802 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ebf1Q07802 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf1Q07802 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf1Q07802 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf1Q07802 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf1Q07802 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.24□□□□□ -0.13
Ebf1Q07802 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.24□□□□□ -0.13
Ebf1Q07802 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf1Q07802 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.24□□□□□ -0.13
Ebf1Q07802 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.24□□□□□ -0.13
Ebf1Q07802 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.24□□□□□ -0.13
Ebf1Q07802 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.24□□□□□ -0.13
Ebf1Q07802 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.24□□□□□ -0.13
Ebf1Q07802 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Ebf1Q07802 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf1Q07802 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.24□□□□□ -0.13
Ebf1Q07802 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.24□□□□□ -0.13
Ebf1Q07802 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf1Q07802 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf1Q07802 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf1Q07802 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf1Q07802 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf1Q07802 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.24□□□□□ -0.13
Ebf1Q07802 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf1Q07802 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf1Q07802 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ebf1Q07802 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.24□□□□□ -0.13
Ebf1Q07802 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf1Q07802 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf1Q07802 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf1Q07802 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.23□□□□□ -0.13
Ebf1Q07802 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf1Q07802 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf1Q07802 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf1Q07802 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf1Q07802 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf1Q07802 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ebf1Q07802 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf1Q07802 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf1Q07802 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.23□□□□□ -0.13
Ebf1Q07802 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf1Q07802 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf1Q07802 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ebf1Q07802 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.23□□□□□ -0.13
Ebf1Q07802 Gm27701-201ENSMUST00000184498 110 ntBASIC14.23□□□□□ -0.13
Ebf1Q07802 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.23□□□□□ -0.13
Ebf1Q07802 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.23□□□□□ -0.13
Ebf1Q07802 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf1Q07802 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ebf1Q07802 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf1Q07802 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf1Q07802 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf1Q07802 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf1Q07802 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf1Q07802 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf1Q07802 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf1Q07802 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf1Q07802 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf1Q07802 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf1Q07802 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf1Q07802 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf1Q07802 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ebf1Q07802 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf1Q07802 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf1Q07802 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Ebf1Q07802 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.22□□□□□ -0.13
Ebf1Q07802 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf1Q07802 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf1Q07802 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Ebf1Q07802 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ebf1Q07802 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf1Q07802 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf1Q07802 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf1Q07802 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf1Q07802 Gm15460-201ENSMUST00000118147 391 ntBASIC14.22□□□□□ -0.13
Ebf1Q07802 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.22□□□□□ -0.13
Ebf1Q07802 Mir1938-201ENSMUST00000158746 100 ntBASIC14.22□□□□□ -0.13
Ebf1Q07802 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf1Q07802 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.22□□□□□ -0.13
Ebf1Q07802 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf1Q07802 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf1Q07802 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf1Q07802 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf1Q07802 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf1Q07802 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf1Q07802 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf1Q07802 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ebf1Q07802 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf1Q07802 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf1Q07802 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf1Q07802 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf1Q07802 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf1Q07802 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf1Q07802 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms