Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs3Q05895 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.35□□□□□ -0.43
Thbs3Q05895 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs3Q05895 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Thbs3Q05895 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.35□□□□□ -0.43
Thbs3Q05895 Gm13453-201ENSMUST00000118708 357 ntBASIC12.35□□□□□ -0.43
Thbs3Q05895 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.35□□□□□ -0.43
Thbs3Q05895 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs3Q05895 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs3Q05895 Gm27680-201ENSMUST00000184192 160 ntBASIC12.35□□□□□ -0.43
Thbs3Q05895 Gm17837-201ENSMUST00000186435 985 ntBASIC12.35□□□□□ -0.43
Thbs3Q05895 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs3Q05895 Gm44344-201ENSMUST00000200287 129 ntBASIC12.35□□□□□ -0.43
Thbs3Q05895 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs3Q05895 Gm6888-201ENSMUST00000221983 706 ntBASIC12.35□□□□□ -0.43
Thbs3Q05895 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs3Q05895 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Thbs3Q05895 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs3Q05895 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Thbs3Q05895 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs3Q05895 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs3Q05895 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Thbs3Q05895 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.35□□□□□ -0.43
Thbs3Q05895 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs3Q05895 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs3Q05895 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs3Q05895 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs3Q05895 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.35□□□□□ -0.43
Thbs3Q05895 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.35□□□□□ -0.43
Thbs3Q05895 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs3Q05895 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs3Q05895 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Thbs3Q05895 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs3Q05895 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs3Q05895 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs3Q05895 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs3Q05895 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.34□□□□□ -0.43
Thbs3Q05895 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs3Q05895 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs3Q05895 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs3Q05895 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs3Q05895 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Thbs3Q05895 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs3Q05895 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs3Q05895 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs3Q05895 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs3Q05895 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs3Q05895 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs3Q05895 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Thbs3Q05895 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.34□□□□□ -0.43
Thbs3Q05895 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Thbs3Q05895 Mir6956-201ENSMUST00000183598 62 ntBASIC12.34□□□□□ -0.43
Thbs3Q05895 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.34□□□□□ -0.43
Thbs3Q05895 Gm37714-201ENSMUST00000194742 342 ntBASIC12.34□□□□□ -0.43
Thbs3Q05895 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs3Q05895 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs3Q05895 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs3Q05895 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs3Q05895 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs3Q05895 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs3Q05895 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs3Q05895 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.34□□□□□ -0.43
Thbs3Q05895 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs3Q05895 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs3Q05895 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Thbs3Q05895 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs3Q05895 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Thbs3Q05895 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Thbs3Q05895 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Thbs3Q05895 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Thbs3Q05895 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Thbs3Q05895 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.33□□□□□ -0.44
Thbs3Q05895 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Thbs3Q05895 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.33□□□□□ -0.44
Thbs3Q05895 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Thbs3Q05895 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.33□□□□□ -0.44
Thbs3Q05895 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 Gm44872-201ENSMUST00000207864 420 ntBASIC12.33□□□□□ -0.44
Thbs3Q05895 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.33□□□□□ -0.44
Thbs3Q05895 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.33□□□□□ -0.44
Thbs3Q05895 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms