Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.14□□□□□ -0.15
Pfdn6Q03958 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Pfdn6Q03958 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Pfdn6Q03958 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn6Q03958 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn6Q03958 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn6Q03958 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.14□□□□□ -0.15
Pfdn6Q03958 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn6Q03958 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn6Q03958 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn6Q03958 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn6Q03958 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.14□□□□□ -0.15
Pfdn6Q03958 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.14□□□□□ -0.15
Pfdn6Q03958 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn6Q03958 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pfdn6Q03958 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Pfdn6Q03958 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn6Q03958 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn6Q03958 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn6Q03958 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn6Q03958 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn6Q03958 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn6Q03958 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pfdn6Q03958 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.13□□□□□ -0.15
Pfdn6Q03958 Gm6222-201ENSMUST00000120787 396 ntBASIC14.13□□□□□ -0.15
Pfdn6Q03958 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.13□□□□□ -0.15
Pfdn6Q03958 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn6Q03958 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Pfdn6Q03958 Gm24158-201ENSMUST00000175263 71 ntBASIC14.13□□□□□ -0.15
Pfdn6Q03958 Gm44608-201ENSMUST00000206827 855 ntBASIC14.13□□□□□ -0.15
Pfdn6Q03958 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn6Q03958 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pfdn6Q03958 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn6Q03958 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn6Q03958 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn6Q03958 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn6Q03958 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn6Q03958 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn6Q03958 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn6Q03958 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Pfdn6Q03958 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.13□□□□□ -0.15
Pfdn6Q03958 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.13□□□□□ -0.15
Pfdn6Q03958 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn6Q03958 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn6Q03958 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.13□□□□□ -0.15
Pfdn6Q03958 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn6Q03958 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn6Q03958 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn6Q03958 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Pfdn6Q03958 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.12□□□□□ -0.15
Pfdn6Q03958 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn6Q03958 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.12□□□□□ -0.15
Pfdn6Q03958 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pfdn6Q03958 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn6Q03958 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.12□□□□□ -0.15
Pfdn6Q03958 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Pfdn6Q03958 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn6Q03958 Gm15957-201ENSMUST00000118893 974 ntBASIC14.12□□□□□ -0.15
Pfdn6Q03958 Gm14822-201ENSMUST00000122247 291 ntBASIC14.12□□□□□ -0.15
Pfdn6Q03958 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.12□□□□□ -0.15
Pfdn6Q03958 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn6Q03958 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn6Q03958 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn6Q03958 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn6Q03958 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Pfdn6Q03958 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn6Q03958 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Pfdn6Q03958 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn6Q03958 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.12□□□□□ -0.15
Pfdn6Q03958 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn6Q03958 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn6Q03958 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn6Q03958 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn6Q03958 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.11□□□□□ -0.15
Pfdn6Q03958 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Pfdn6Q03958 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn6Q03958 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn6Q03958 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn6Q03958 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn6Q03958 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Pfdn6Q03958 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn6Q03958 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.11□□□□□ -0.15
Pfdn6Q03958 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn6Q03958 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.11□□□□□ -0.15
Pfdn6Q03958 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Pfdn6Q03958 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn6Q03958 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Pfdn6Q03958 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn6Q03958 Gm6736-201ENSMUST00000166583 948 ntBASIC14.11□□□□□ -0.15
Pfdn6Q03958 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.11□□□□□ -0.15
Pfdn6Q03958 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn6Q03958 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn6Q03958 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.11□□□□□ -0.15
Pfdn6Q03958 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn6Q03958 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn6Q03958 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn6Q03958 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.11□□□□□ -0.15
Pfdn6Q03958 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.11□□□□□ -0.15
Pfdn6Q03958 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.11□□□□□ -0.15
Pfdn6Q03958 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms