Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a2Q02788 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a2Q02788 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.02□□□□□ -0.16
Col6a2Q02788 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.02□□□□□ -0.16
Col6a2Q02788 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a2Q02788 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.02□□□□□ -0.16
Col6a2Q02788 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a2Q02788 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a2Q02788 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
Col6a2Q02788 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a2Q02788 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Col6a2Q02788 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.02□□□□□ -0.17
Col6a2Q02788 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Col6a2Q02788 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.02□□□□□ -0.17
Col6a2Q02788 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.02□□□□□ -0.17
Col6a2Q02788 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Col6a2Q02788 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.02□□□□□ -0.17
Col6a2Q02788 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.02□□□□□ -0.17
Col6a2Q02788 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.02□□□□□ -0.17
Col6a2Q02788 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a2Q02788 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Col6a2Q02788 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.02□□□□□ -0.17
Col6a2Q02788 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a2Q02788 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a2Q02788 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a2Q02788 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a2Q02788 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a2Q02788 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a2Q02788 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a2Q02788 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a2Q02788 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Col6a2Q02788 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.01□□□□□ -0.17
Col6a2Q02788 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a2Q02788 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a2Q02788 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.01□□□□□ -0.17
Col6a2Q02788 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.01□□□□□ -0.17
Col6a2Q02788 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.01□□□□□ -0.17
Col6a2Q02788 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a2Q02788 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a2Q02788 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a2Q02788 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a2Q02788 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a2Q02788 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a2Q02788 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a2Q02788 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col6a2Q02788 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a2Q02788 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a2Q02788 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a2Q02788 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a2Q02788 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a2Q02788 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a2Q02788 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a2Q02788 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Col6a2Q02788 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a2Q02788 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14□□□□□ -0.17
Col6a2Q02788 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14□□□□□ -0.17
Col6a2Q02788 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Col6a2Q02788 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a2Q02788 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a2Q02788 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a2Q02788 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a2Q02788 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a2Q02788 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a2Q02788 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a2Q02788 Gm14928-201ENSMUST00000120198 477 ntBASIC14□□□□□ -0.17
Col6a2Q02788 Gm5745-201ENSMUST00000183748 313 ntBASIC14□□□□□ -0.17
Col6a2Q02788 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14□□□□□ -0.17
Col6a2Q02788 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14□□□□□ -0.17
Col6a2Q02788 AC140375.2-201ENSMUST00000225283 584 ntBASIC14□□□□□ -0.17
Col6a2Q02788 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a2Q02788 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14□□□□□ -0.17
Col6a2Q02788 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a2Q02788 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a2Q02788 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a2Q02788 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a2Q02788 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Col6a2Q02788 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a2Q02788 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a2Q02788 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a2Q02788 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a2Q02788 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a2Q02788 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a2Q02788 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a2Q02788 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Col6a2Q02788 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a2Q02788 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a2Q02788 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a2Q02788 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a2Q02788 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a2Q02788 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a2Q02788 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Col6a2Q02788 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a2Q02788 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a2Q02788 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
Col6a2Q02788 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Col6a2Q02788 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.99□□□□□ -0.17
Col6a2Q02788 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a2Q02788 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Col6a2Q02788 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a2Q02788 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms