Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Xrn1P97789 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
Xrn1P97789 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Xrn1P97789 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Xrn1P97789 AC096628.2-201ENSMUST00000225443 1413 ntBASIC19.58■□□□□ 0.72
Xrn1P97789 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Xrn1P97789 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Xrn1P97789 CT573034.1-201ENSMUST00000222983 313 ntBASIC19.57■□□□□ 0.72
Xrn1P97789 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Xrn1P97789 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Xrn1P97789 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Xrn1P97789 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Xrn1P97789 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC19.57■□□□□ 0.72
Xrn1P97789 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Xrn1P97789 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Xrn1P97789 Gm38049-201ENSMUST00000195698 1372 ntBASIC19.57■□□□□ 0.72
Xrn1P97789 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Xrn1P97789 Gm25214-201ENSMUST00000104573 129 ntBASIC19.56■□□□□ 0.72
Xrn1P97789 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Xrn1P97789 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC19.56■□□□□ 0.72
Xrn1P97789 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Xrn1P97789 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Xrn1P97789 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Xrn1P97789 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Xrn1P97789 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Xrn1P97789 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Xrn1P97789 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Xrn1P97789 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Xrn1P97789 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Xrn1P97789 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Xrn1P97789 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Xrn1P97789 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC19.56■□□□□ 0.72
Xrn1P97789 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC19.56■□□□□ 0.72
Xrn1P97789 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Xrn1P97789 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Xrn1P97789 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC19.56■□□□□ 0.72
Xrn1P97789 Gm10608-202ENSMUST00000213924 676 ntBASIC19.56■□□□□ 0.72
Xrn1P97789 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Xrn1P97789 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
Xrn1P97789 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Xrn1P97789 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Xrn1P97789 Gm11960-202ENSMUST00000181063 2858 ntBASIC19.56■□□□□ 0.72
Xrn1P97789 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Xrn1P97789 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Xrn1P97789 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Xrn1P97789 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Xrn1P97789 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Xrn1P97789 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Xrn1P97789 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Xrn1P97789 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Xrn1P97789 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Xrn1P97789 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Xrn1P97789 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Xrn1P97789 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC19.55■□□□□ 0.72
Xrn1P97789 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
Xrn1P97789 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Xrn1P97789 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Xrn1P97789 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Xrn1P97789 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Xrn1P97789 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Xrn1P97789 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Xrn1P97789 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Xrn1P97789 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Xrn1P97789 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Xrn1P97789 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Xrn1P97789 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC19.54■□□□□ 0.72
Xrn1P97789 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Xrn1P97789 AC113441.2-201ENSMUST00000221538 1468 ntBASIC19.54■□□□□ 0.72
Xrn1P97789 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC19.54■□□□□ 0.72
Xrn1P97789 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Xrn1P97789 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Xrn1P97789 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC19.54■□□□□ 0.72
Xrn1P97789 Gm45186-201ENSMUST00000206874 478 ntBASIC19.54■□□□□ 0.72
Xrn1P97789 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Xrn1P97789 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Xrn1P97789 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Xrn1P97789 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Xrn1P97789 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Xrn1P97789 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Xrn1P97789 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Xrn1P97789 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Xrn1P97789 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Xrn1P97789 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Xrn1P97789 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Xrn1P97789 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC19.54■□□□□ 0.72
Xrn1P97789 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Xrn1P97789 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Xrn1P97789 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Xrn1P97789 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Xrn1P97789 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC19.53■□□□□ 0.72
Xrn1P97789 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Xrn1P97789 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Xrn1P97789 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Xrn1P97789 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Xrn1P97789 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC19.53■□□□□ 0.72
Xrn1P97789 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.53■□□□□ 0.72
Xrn1P97789 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Xrn1P97789 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Xrn1P97789 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Xrn1P97789 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms