Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gbx1P82976 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gbx1P82976 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gbx1P82976 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gbx1P82976 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gbx1P82976 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gbx1P82976 Gm13365-201ENSMUST00000121188 973 ntBASIC13.2□□□□□ -0.3
Gbx1P82976 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gbx1P82976 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gbx1P82976 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.2□□□□□ -0.3
Gbx1P82976 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.2□□□□□ -0.3
Gbx1P82976 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.2□□□□□ -0.3
Gbx1P82976 Gm27494-201ENSMUST00000184735 189 ntBASIC13.2□□□□□ -0.3
Gbx1P82976 Gm8000-201ENSMUST00000188378 592 ntBASIC13.2□□□□□ -0.3
Gbx1P82976 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Gbx1P82976 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.2□□□□□ -0.3
Gbx1P82976 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.2□□□□□ -0.3
Gbx1P82976 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.2□□□□□ -0.3
Gbx1P82976 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gbx1P82976 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.2□□□□□ -0.3
Gbx1P82976 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gbx1P82976 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gbx1P82976 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gbx1P82976 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gbx1P82976 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.2□□□□□ -0.3
Gbx1P82976 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gbx1P82976 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gbx1P82976 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gbx1P82976 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gbx1P82976 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gbx1P82976 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gbx1P82976 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Gbx1P82976 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gbx1P82976 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gbx1P82976 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gbx1P82976 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gbx1P82976 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gbx1P82976 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gbx1P82976 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.19□□□□□ -0.3
Gbx1P82976 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gbx1P82976 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Gbx1P82976 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gbx1P82976 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gbx1P82976 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gbx1P82976 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.19□□□□□ -0.3
Gbx1P82976 Gm15957-201ENSMUST00000118893 974 ntBASIC13.19□□□□□ -0.3
Gbx1P82976 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.19□□□□□ -0.3
Gbx1P82976 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gbx1P82976 Gm18889-201ENSMUST00000174284 929 ntBASIC13.19□□□□□ -0.3
Gbx1P82976 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.19□□□□□ -0.3
Gbx1P82976 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.19□□□□□ -0.3
Gbx1P82976 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.19□□□□□ -0.3
Gbx1P82976 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gbx1P82976 Gm15823-201ENSMUST00000064305 670 ntBASIC13.19□□□□□ -0.3
Gbx1P82976 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gbx1P82976 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gbx1P82976 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gbx1P82976 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gbx1P82976 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gbx1P82976 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gbx1P82976 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gbx1P82976 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gbx1P82976 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.19□□□□□ -0.3
Gbx1P82976 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.19□□□□□ -0.3
Gbx1P82976 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.19□□□□□ -0.3
Gbx1P82976 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gbx1P82976 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gbx1P82976 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.19□□□□□ -0.3
Gbx1P82976 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.19□□□□□ -0.3
Gbx1P82976 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gbx1P82976 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Gbx1P82976 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gbx1P82976 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gbx1P82976 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Gbx1P82976 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Gbx1P82976 BC001981-202ENSMUST00000191393 1545 ntBASIC13.18□□□□□ -0.3
Gbx1P82976 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gbx1P82976 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gbx1P82976 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Gbx1P82976 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gbx1P82976 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Gbx1P82976 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.18□□□□□ -0.3
Gbx1P82976 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gbx1P82976 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Gbx1P82976 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Gbx1P82976 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.18□□□□□ -0.3
Gbx1P82976 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gbx1P82976 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gbx1P82976 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gbx1P82976 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gbx1P82976 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gbx1P82976 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.18□□□□□ -0.3
Gbx1P82976 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Gbx1P82976 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.18□□□□□ -0.3
Gbx1P82976 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Gbx1P82976 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gbx1P82976 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gbx1P82976 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gbx1P82976 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gbx1P82976 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms