Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SgcaP82350 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.79□□□□□ -0.52
SgcaP82350 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.79□□□□□ -0.52
SgcaP82350 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.79□□□□□ -0.52
SgcaP82350 Gm7787-201ENSMUST00000216858 688 ntBASIC11.79□□□□□ -0.52
SgcaP82350 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SgcaP82350 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcaP82350 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcaP82350 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SgcaP82350 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SgcaP82350 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcaP82350 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SgcaP82350 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcaP82350 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SgcaP82350 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
SgcaP82350 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcaP82350 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcaP82350 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcaP82350 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcaP82350 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcaP82350 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcaP82350 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcaP82350 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
SgcaP82350 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
SgcaP82350 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SgcaP82350 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcaP82350 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SgcaP82350 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcaP82350 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcaP82350 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcaP82350 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SgcaP82350 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcaP82350 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC11.78□□□□□ -0.52
SgcaP82350 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC11.78□□□□□ -0.52
SgcaP82350 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcaP82350 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.78□□□□□ -0.52
SgcaP82350 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcaP82350 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcaP82350 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcaP82350 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SgcaP82350 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.78□□□□□ -0.52
SgcaP82350 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcaP82350 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SgcaP82350 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
SgcaP82350 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.78□□□□□ -0.52
SgcaP82350 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
SgcaP82350 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcaP82350 Gm8584-201ENSMUST00000171982 758 ntBASIC11.78□□□□□ -0.52
SgcaP82350 Gm4535-201ENSMUST00000182274 558 ntBASIC11.78□□□□□ -0.52
SgcaP82350 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC11.78□□□□□ -0.52
SgcaP82350 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcaP82350 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcaP82350 AC154471.1-201ENSMUST00000224418 436 ntBASIC11.78□□□□□ -0.52
SgcaP82350 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcaP82350 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcaP82350 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcaP82350 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcaP82350 Gm10355-201ENSMUST00000097146 517 ntBASIC11.78□□□□□ -0.52
SgcaP82350 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SgcaP82350 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcaP82350 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
SgcaP82350 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcaP82350 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcaP82350 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcaP82350 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
SgcaP82350 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SgcaP82350 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcaP82350 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcaP82350 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
SgcaP82350 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
SgcaP82350 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SgcaP82350 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
SgcaP82350 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.52
SgcaP82350 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.77□□□□□ -0.52
SgcaP82350 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SgcaP82350 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
SgcaP82350 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SgcaP82350 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
SgcaP82350 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SgcaP82350 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
SgcaP82350 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.77□□□□□ -0.53
SgcaP82350 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
SgcaP82350 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SgcaP82350 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
SgcaP82350 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SgcaP82350 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.77□□□□□ -0.53
SgcaP82350 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SgcaP82350 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC11.77□□□□□ -0.53
SgcaP82350 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
SgcaP82350 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
SgcaP82350 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.77□□□□□ -0.53
SgcaP82350 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SgcaP82350 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SgcaP82350 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SgcaP82350 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SgcaP82350 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
SgcaP82350 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SgcaP82350 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SgcaP82350 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SgcaP82350 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms