Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcbP82349 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcbP82349 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.54□□□□□ -0.4
SgcbP82349 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcbP82349 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcbP82349 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcbP82349 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.54□□□□□ -0.4
SgcbP82349 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.54□□□□□ -0.4
SgcbP82349 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SgcbP82349 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.54□□□□□ -0.4
SgcbP82349 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SgcbP82349 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SgcbP82349 Gm27321-201ENSMUST00000185021 205 ntBASIC12.54□□□□□ -0.4
SgcbP82349 Gm7775-201ENSMUST00000218871 853 ntBASIC12.54□□□□□ -0.4
SgcbP82349 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcbP82349 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcbP82349 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcbP82349 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcbP82349 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SgcbP82349 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.54□□□□□ -0.4
SgcbP82349 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SgcbP82349 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
SgcbP82349 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcbP82349 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SgcbP82349 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcbP82349 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcbP82349 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcbP82349 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.54□□□□□ -0.4
SgcbP82349 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.54□□□□□ -0.4
SgcbP82349 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcbP82349 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SgcbP82349 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcbP82349 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcbP82349 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
SgcbP82349 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcbP82349 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcbP82349 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SgcbP82349 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SgcbP82349 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SgcbP82349 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
SgcbP82349 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SgcbP82349 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
SgcbP82349 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SgcbP82349 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SgcbP82349 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SgcbP82349 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SgcbP82349 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.53□□□□□ -0.4
SgcbP82349 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.53□□□□□ -0.4
SgcbP82349 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SgcbP82349 Gm15393-201ENSMUST00000120499 219 ntBASIC12.53□□□□□ -0.4
SgcbP82349 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SgcbP82349 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SgcbP82349 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SgcbP82349 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SgcbP82349 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC12.53□□□□□ -0.4
SgcbP82349 Gm44608-201ENSMUST00000206827 855 ntBASIC12.53□□□□□ -0.4
SgcbP82349 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SgcbP82349 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SgcbP82349 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
SgcbP82349 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
SgcbP82349 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SgcbP82349 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SgcbP82349 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SgcbP82349 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SgcbP82349 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SgcbP82349 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SgcbP82349 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SgcbP82349 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.53□□□□□ -0.4
SgcbP82349 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SgcbP82349 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SgcbP82349 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
SgcbP82349 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SgcbP82349 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SgcbP82349 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
SgcbP82349 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
SgcbP82349 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
SgcbP82349 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
SgcbP82349 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.52□□□□□ -0.4
SgcbP82349 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
SgcbP82349 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SgcbP82349 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SgcbP82349 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SgcbP82349 Gm15460-201ENSMUST00000118147 391 ntBASIC12.52□□□□□ -0.41
SgcbP82349 Gm12428-201ENSMUST00000119844 727 ntBASIC12.52□□□□□ -0.41
SgcbP82349 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.52□□□□□ -0.41
SgcbP82349 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SgcbP82349 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SgcbP82349 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SgcbP82349 Gm44882-201ENSMUST00000205702 802 ntBASIC12.52□□□□□ -0.41
SgcbP82349 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SgcbP82349 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SgcbP82349 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SgcbP82349 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
SgcbP82349 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SgcbP82349 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SgcbP82349 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SgcbP82349 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SgcbP82349 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.52□□□□□ -0.41
SgcbP82349 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SgcbP82349 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms