Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pdlim4P70271 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Pdlim4P70271 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pdlim4P70271 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.73□□□□□ -0.53
Pdlim4P70271 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pdlim4P70271 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pdlim4P70271 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pdlim4P70271 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Pdlim4P70271 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Pdlim4P70271 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Pdlim4P70271 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pdlim4P70271 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pdlim4P70271 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pdlim4P70271 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Pdlim4P70271 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pdlim4P70271 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pdlim4P70271 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pdlim4P70271 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pdlim4P70271 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pdlim4P70271 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Pdlim4P70271 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Pdlim4P70271 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pdlim4P70271 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.72□□□□□ -0.53
Pdlim4P70271 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.72□□□□□ -0.53
Pdlim4P70271 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.72□□□□□ -0.53
Pdlim4P70271 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.72□□□□□ -0.53
Pdlim4P70271 Gm9719-201ENSMUST00000162765 543 ntBASIC11.72□□□□□ -0.53
Pdlim4P70271 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.72□□□□□ -0.53
Pdlim4P70271 Gm29541-201ENSMUST00000191351 678 ntBASIC11.72□□□□□ -0.53
Pdlim4P70271 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.72□□□□□ -0.53
Pdlim4P70271 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.72□□□□□ -0.53
Pdlim4P70271 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.72□□□□□ -0.53
Pdlim4P70271 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Pdlim4P70271 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pdlim4P70271 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Pdlim4P70271 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pdlim4P70271 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pdlim4P70271 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.72□□□□□ -0.53
Pdlim4P70271 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdlim4P70271 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdlim4P70271 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdlim4P70271 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pdlim4P70271 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pdlim4P70271 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Pdlim4P70271 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Pdlim4P70271 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdlim4P70271 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Pdlim4P70271 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.71□□□□□ -0.53
Pdlim4P70271 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pdlim4P70271 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pdlim4P70271 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Pdlim4P70271 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdlim4P70271 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pdlim4P70271 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdlim4P70271 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdlim4P70271 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdlim4P70271 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.71□□□□□ -0.53
Pdlim4P70271 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Pdlim4P70271 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdlim4P70271 Gm15693-201ENSMUST00000120470 637 ntBASIC11.71□□□□□ -0.53
Pdlim4P70271 Gm23547-201ENSMUST00000158210 271 ntBASIC11.71□□□□□ -0.53
Pdlim4P70271 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pdlim4P70271 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Pdlim4P70271 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pdlim4P70271 Mir6956-201ENSMUST00000183598 62 ntBASIC11.71□□□□□ -0.53
Pdlim4P70271 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdlim4P70271 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Pdlim4P70271 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pdlim4P70271 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms