Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lhx1P63006 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Lhx1P63006 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lhx1P63006 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx1P63006 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx1P63006 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx1P63006 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.78□□□□□ -0.2
Lhx1P63006 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx1P63006 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx1P63006 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx1P63006 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx1P63006 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.78□□□□□ -0.2
Lhx1P63006 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx1P63006 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx1P63006 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx1P63006 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx1P63006 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx1P63006 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Lhx1P63006 Gm13385-201ENSMUST00000121089 220 ntBASIC13.78□□□□□ -0.2
Lhx1P63006 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.78□□□□□ -0.2
Lhx1P63006 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx1P63006 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.78□□□□□ -0.2
Lhx1P63006 Gm29741-201ENSMUST00000192667 421 ntBASIC13.78□□□□□ -0.2
Lhx1P63006 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.78□□□□□ -0.2
Lhx1P63006 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.78□□□□□ -0.2
Lhx1P63006 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.78□□□□□ -0.2
Lhx1P63006 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx1P63006 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx1P63006 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx1P63006 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx1P63006 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Lhx1P63006 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx1P63006 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx1P63006 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx1P63006 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.78□□□□□ -0.2
Lhx1P63006 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx1P63006 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Lhx1P63006 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx1P63006 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Lhx1P63006 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Lhx1P63006 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.77□□□□□ -0.2
Lhx1P63006 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Lhx1P63006 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Lhx1P63006 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Lhx1P63006 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx1P63006 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx1P63006 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Lhx1P63006 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx1P63006 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx1P63006 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx1P63006 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.77□□□□□ -0.21
Lhx1P63006 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.77□□□□□ -0.21
Lhx1P63006 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx1P63006 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx1P63006 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx1P63006 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx1P63006 Gm8927-201ENSMUST00000181978 981 ntBASIC13.77□□□□□ -0.21
Lhx1P63006 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Lhx1P63006 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.77□□□□□ -0.21
Lhx1P63006 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.77□□□□□ -0.21
Lhx1P63006 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx1P63006 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.77□□□□□ -0.21
Lhx1P63006 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Lhx1P63006 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.77□□□□□ -0.21
Lhx1P63006 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx1P63006 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx1P63006 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx1P63006 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx1P63006 Gm3222-201ENSMUST00000071282 990 ntBASIC13.77□□□□□ -0.21
Lhx1P63006 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx1P63006 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx1P63006 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Lhx1P63006 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx1P63006 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx1P63006 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx1P63006 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx1P63006 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx1P63006 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Lhx1P63006 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Lhx1P63006 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx1P63006 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx1P63006 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lhx1P63006 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lhx1P63006 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lhx1P63006 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.76□□□□□ -0.21
Lhx1P63006 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lhx1P63006 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lhx1P63006 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lhx1P63006 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lhx1P63006 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lhx1P63006 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Lhx1P63006 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lhx1P63006 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lhx1P63006 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lhx1P63006 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lhx1P63006 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Lhx1P63006 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lhx1P63006 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.76□□□□□ -0.21
Lhx1P63006 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lhx1P63006 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms