Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lrch1P62046 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.47■□□□□ 0.23
Lrch1P62046 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lrch1P62046 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lrch1P62046 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lrch1P62046 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lrch1P62046 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Lrch1P62046 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.47■□□□□ 0.23
Lrch1P62046 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrch1P62046 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.46■□□□□ 0.23
Lrch1P62046 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.46■□□□□ 0.23
Lrch1P62046 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrch1P62046 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrch1P62046 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.46■□□□□ 0.23
Lrch1P62046 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.46■□□□□ 0.23
Lrch1P62046 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrch1P62046 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrch1P62046 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrch1P62046 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrch1P62046 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Lrch1P62046 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC16.46■□□□□ 0.23
Lrch1P62046 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lrch1P62046 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC16.46■□□□□ 0.23
Lrch1P62046 Mir7070-201ENSMUST00000183657 86 ntBASIC16.46■□□□□ 0.23
Lrch1P62046 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC16.46■□□□□ 0.23
Lrch1P62046 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC16.46■□□□□ 0.23
Lrch1P62046 Gm45865-201ENSMUST00000211815 945 ntBASIC16.46■□□□□ 0.23
Lrch1P62046 Gm9176-201ENSMUST00000219955 1120 ntBASIC16.46■□□□□ 0.23
Lrch1P62046 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC16.46■□□□□ 0.23
Lrch1P62046 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrch1P62046 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Lrch1P62046 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrch1P62046 Gm24447-201ENSMUST00000083977 338 ntBASIC16.46■□□□□ 0.23
Lrch1P62046 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC16.46■□□□□ 0.23
Lrch1P62046 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Lrch1P62046 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrch1P62046 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrch1P62046 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrch1P62046 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lrch1P62046 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrch1P62046 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lrch1P62046 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrch1P62046 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrch1P62046 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrch1P62046 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Lrch1P62046 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Lrch1P62046 Gm5620-201ENSMUST00000077991 1348 ntBASIC16.45■□□□□ 0.22
Lrch1P62046 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrch1P62046 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.45■□□□□ 0.22
Lrch1P62046 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrch1P62046 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrch1P62046 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lrch1P62046 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lrch1P62046 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lrch1P62046 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrch1P62046 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.45■□□□□ 0.22
Lrch1P62046 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrch1P62046 Gm22323-201ENSMUST00000103832 109 ntBASIC16.45■□□□□ 0.22
Lrch1P62046 Gm26927-201ENSMUST00000182385 965 ntBASIC16.45■□□□□ 0.22
Lrch1P62046 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrch1P62046 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrch1P62046 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrch1P62046 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrch1P62046 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrch1P62046 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC16.45■□□□□ 0.22
Lrch1P62046 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lrch1P62046 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Lrch1P62046 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Lrch1P62046 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrch1P62046 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrch1P62046 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrch1P62046 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrch1P62046 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.45■□□□□ 0.22
Lrch1P62046 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.44■□□□□ 0.22
Lrch1P62046 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrch1P62046 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.44■□□□□ 0.22
Lrch1P62046 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lrch1P62046 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lrch1P62046 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Lrch1P62046 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC16.44■□□□□ 0.22
Lrch1P62046 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lrch1P62046 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lrch1P62046 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Lrch1P62046 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC16.44■□□□□ 0.22
Lrch1P62046 Gm38000-201ENSMUST00000192390 1215 ntBASIC16.44■□□□□ 0.22
Lrch1P62046 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.44■□□□□ 0.22
Lrch1P62046 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Lrch1P62046 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrch1P62046 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Lrch1P62046 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lrch1P62046 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.44■□□□□ 0.22
Lrch1P62046 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrch1P62046 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrch1P62046 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrch1P62046 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.44■□□□□ 0.22
Lrch1P62046 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lrch1P62046 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrch1P62046 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrch1P62046 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Lrch1P62046 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms