Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Sec61a1P61620 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Sec61a1P61620 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Sec61a1P61620 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61a1P61620 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.41□□□□□ -0.42
Sec61a1P61620 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61a1P61620 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Sec61a1P61620 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Sec61a1P61620 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Sec61a1P61620 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Sec61a1P61620 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.4□□□□□ -0.42
Sec61a1P61620 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Sec61a1P61620 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.4□□□□□ -0.42
Sec61a1P61620 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.4□□□□□ -0.42
Sec61a1P61620 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.4□□□□□ -0.42
Sec61a1P61620 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.4□□□□□ -0.42
Sec61a1P61620 Gm11025-201ENSMUST00000140773 466 ntBASIC12.4□□□□□ -0.42
Sec61a1P61620 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.4□□□□□ -0.42
Sec61a1P61620 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.4□□□□□ -0.42
Sec61a1P61620 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.4□□□□□ -0.42
Sec61a1P61620 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Sec61a1P61620 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Sec61a1P61620 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a1P61620 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sec61a1P61620 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Sec61a1P61620 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sec61a1P61620 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sec61a1P61620 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Sec61a1P61620 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a1P61620 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a1P61620 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sec61a1P61620 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a1P61620 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a1P61620 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a1P61620 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a1P61620 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.39□□□□□ -0.43
Sec61a1P61620 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a1P61620 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sec61a1P61620 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Sec61a1P61620 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Sec61a1P61620 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a1P61620 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a1P61620 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.39□□□□□ -0.43
Sec61a1P61620 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a1P61620 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a1P61620 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Sec61a1P61620 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a1P61620 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a1P61620 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Sec61a1P61620 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sec61a1P61620 Rpph1-201ENSMUST00000175096 319 ntBASIC12.39□□□□□ -0.43
Sec61a1P61620 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.39□□□□□ -0.43
Sec61a1P61620 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a1P61620 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a1P61620 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Sec61a1P61620 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.39□□□□□ -0.43
Sec61a1P61620 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sec61a1P61620 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a1P61620 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a1P61620 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a1P61620 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a1P61620 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a1P61620 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a1P61620 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Sec61a1P61620 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a1P61620 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a1P61620 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a1P61620 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a1P61620 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms