Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fdft1P53798 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Fdft1P53798 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fdft1P53798 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fdft1P53798 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Fdft1P53798 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fdft1P53798 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Fdft1P53798 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fdft1P53798 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Fdft1P53798 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Fdft1P53798 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fdft1P53798 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.05□□□□□ -0.16
Fdft1P53798 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fdft1P53798 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fdft1P53798 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fdft1P53798 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fdft1P53798 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fdft1P53798 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Fdft1P53798 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fdft1P53798 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Fdft1P53798 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fdft1P53798 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fdft1P53798 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fdft1P53798 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Fdft1P53798 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fdft1P53798 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.05□□□□□ -0.16
Fdft1P53798 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fdft1P53798 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fdft1P53798 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.05□□□□□ -0.16
Fdft1P53798 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.05□□□□□ -0.16
Fdft1P53798 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fdft1P53798 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.05□□□□□ -0.16
Fdft1P53798 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.05□□□□□ -0.16
Fdft1P53798 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.05□□□□□ -0.16
Fdft1P53798 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.05□□□□□ -0.16
Fdft1P53798 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fdft1P53798 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fdft1P53798 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fdft1P53798 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fdft1P53798 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fdft1P53798 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fdft1P53798 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fdft1P53798 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fdft1P53798 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.05□□□□□ -0.16
Fdft1P53798 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fdft1P53798 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fdft1P53798 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fdft1P53798 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fdft1P53798 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Fdft1P53798 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.05□□□□□ -0.16
Fdft1P53798 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Fdft1P53798 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fdft1P53798 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Fdft1P53798 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Fdft1P53798 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fdft1P53798 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fdft1P53798 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fdft1P53798 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Fdft1P53798 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fdft1P53798 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fdft1P53798 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fdft1P53798 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Fdft1P53798 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fdft1P53798 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fdft1P53798 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.04□□□□□ -0.16
Fdft1P53798 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fdft1P53798 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Fdft1P53798 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fdft1P53798 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fdft1P53798 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fdft1P53798 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.04□□□□□ -0.16
Fdft1P53798 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.04□□□□□ -0.16
Fdft1P53798 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Fdft1P53798 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.04□□□□□ -0.16
Fdft1P53798 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.04□□□□□ -0.16
Fdft1P53798 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.04□□□□□ -0.16
Fdft1P53798 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.04□□□□□ -0.16
Fdft1P53798 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fdft1P53798 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fdft1P53798 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fdft1P53798 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.04□□□□□ -0.16
Fdft1P53798 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fdft1P53798 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Fdft1P53798 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fdft1P53798 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Fdft1P53798 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fdft1P53798 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fdft1P53798 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fdft1P53798 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fdft1P53798 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fdft1P53798 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Fdft1P53798 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Fdft1P53798 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fdft1P53798 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Fdft1P53798 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fdft1P53798 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Fdft1P53798 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Fdft1P53798 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.03□□□□□ -0.16
Fdft1P53798 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fdft1P53798 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms