Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Sox3P53784 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Sox3P53784 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 Gm5566-201ENSMUST00000116118 459 ntBASIC13.48□□□□□ -0.25
Sox3P53784 Gm4875-201ENSMUST00000118257 786 ntBASIC13.48□□□□□ -0.25
Sox3P53784 Gm11918-201ENSMUST00000121660 179 ntBASIC13.48□□□□□ -0.25
Sox3P53784 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.48□□□□□ -0.25
Sox3P53784 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.48□□□□□ -0.25
Sox3P53784 Gm37917-201ENSMUST00000194711 392 ntBASIC13.48□□□□□ -0.25
Sox3P53784 Gm45331-201ENSMUST00000209868 554 ntBASIC13.48□□□□□ -0.25
Sox3P53784 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.48□□□□□ -0.25
Sox3P53784 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.48□□□□□ -0.25
Sox3P53784 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.48□□□□□ -0.25
Sox3P53784 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Sox3P53784 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.48□□□□□ -0.25
Sox3P53784 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox3P53784 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox3P53784 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox3P53784 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox3P53784 Celf4-206ENSMUST00000224553 1729 ntBASIC13.47□□□□□ -0.25
Sox3P53784 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox3P53784 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox3P53784 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sox3P53784 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox3P53784 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox3P53784 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sox3P53784 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Sox3P53784 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Sox3P53784 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox3P53784 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sox3P53784 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Sox3P53784 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox3P53784 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox3P53784 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox3P53784 Gm11425-201ENSMUST00000119608 498 ntBASIC13.47□□□□□ -0.25
Sox3P53784 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox3P53784 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.47□□□□□ -0.25
Sox3P53784 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.47□□□□□ -0.25
Sox3P53784 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Sox3P53784 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.47□□□□□ -0.25
Sox3P53784 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox3P53784 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox3P53784 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox3P53784 Gm9396-201ENSMUST00000076703 567 ntBASIC13.47□□□□□ -0.25
Sox3P53784 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox3P53784 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.47□□□□□ -0.25
Sox3P53784 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.47□□□□□ -0.25
Sox3P53784 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sox3P53784 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.47□□□□□ -0.25
Sox3P53784 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox3P53784 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox3P53784 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.47□□□□□ -0.25
Sox3P53784 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.47□□□□□ -0.25
Sox3P53784 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Sox3P53784 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox3P53784 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.47□□□□□ -0.25
Sox3P53784 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Sox3P53784 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox3P53784 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox3P53784 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox3P53784 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Sox3P53784 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.46□□□□□ -0.25
Sox3P53784 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox3P53784 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sox3P53784 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox3P53784 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
Sox3P53784 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox3P53784 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Sox3P53784 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Sox3P53784 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Sox3P53784 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms