Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SftpbP50405 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SftpbP50405 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SftpbP50405 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SftpbP50405 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.38□□□□□ -0.11
SftpbP50405 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpbP50405 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpbP50405 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpbP50405 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SftpbP50405 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpbP50405 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpbP50405 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.38□□□□□ -0.11
SftpbP50405 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.38□□□□□ -0.11
SftpbP50405 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SftpbP50405 Gm17271-201ENSMUST00000165535 355 ntBASIC14.38□□□□□ -0.11
SftpbP50405 Mir3113-201ENSMUST00000175478 76 ntBASIC14.38□□□□□ -0.11
SftpbP50405 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.38□□□□□ -0.11
SftpbP50405 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.38□□□□□ -0.11
SftpbP50405 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpbP50405 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpbP50405 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpbP50405 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpbP50405 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SftpbP50405 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpbP50405 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpbP50405 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpbP50405 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpbP50405 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpbP50405 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SftpbP50405 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.38□□□□□ -0.11
SftpbP50405 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpbP50405 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SftpbP50405 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpbP50405 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpbP50405 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.37□□□□□ -0.11
SftpbP50405 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpbP50405 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpbP50405 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.37□□□□□ -0.11
SftpbP50405 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpbP50405 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpbP50405 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SftpbP50405 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpbP50405 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SftpbP50405 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpbP50405 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SftpbP50405 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.37□□□□□ -0.11
SftpbP50405 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SftpbP50405 Mir8117-201ENSMUST00000184773 107 ntBASIC14.37□□□□□ -0.11
SftpbP50405 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.37□□□□□ -0.11
SftpbP50405 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.37□□□□□ -0.11
SftpbP50405 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.37□□□□□ -0.11
SftpbP50405 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpbP50405 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
SftpbP50405 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpbP50405 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpbP50405 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SftpbP50405 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpbP50405 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SftpbP50405 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpbP50405 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
SftpbP50405 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpbP50405 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpbP50405 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SftpbP50405 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SftpbP50405 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SftpbP50405 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpbP50405 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpbP50405 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SftpbP50405 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpbP50405 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpbP50405 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.36□□□□□ -0.11
SftpbP50405 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpbP50405 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpbP50405 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpbP50405 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpbP50405 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SftpbP50405 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.36□□□□□ -0.11
SftpbP50405 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpbP50405 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.36□□□□□ -0.11
SftpbP50405 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SftpbP50405 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpbP50405 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SftpbP50405 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SftpbP50405 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SftpbP50405 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.36□□□□□ -0.11
SftpbP50405 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
SftpbP50405 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.36□□□□□ -0.11
SftpbP50405 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SftpbP50405 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpbP50405 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpbP50405 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SftpbP50405 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpbP50405 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpbP50405 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpbP50405 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SftpbP50405 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.36□□□□□ -0.11
SftpbP50405 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.36□□□□□ -0.11
SftpbP50405 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpbP50405 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpbP50405 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms