Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx2P48379 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx2P48379 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.74□□□□□ -0.05
Rfx2P48379 Gm4875-201ENSMUST00000118257 786 ntBASIC14.74□□□□□ -0.05
Rfx2P48379 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.74□□□□□ -0.05
Rfx2P48379 Gm11424-201ENSMUST00000121929 829 ntBASIC14.74□□□□□ -0.05
Rfx2P48379 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Rfx2P48379 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx2P48379 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx2P48379 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.74□□□□□ -0.05
Rfx2P48379 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.74□□□□□ -0.05
Rfx2P48379 Gm28631-201ENSMUST00000190740 334 ntBASIC14.74□□□□□ -0.05
Rfx2P48379 Gm43703-201ENSMUST00000200523 763 ntBASIC14.74□□□□□ -0.05
Rfx2P48379 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx2P48379 Gm20445-201ENSMUST00000061905 565 ntBASIC14.74□□□□□ -0.05
Rfx2P48379 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Rfx2P48379 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx2P48379 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx2P48379 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx2P48379 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx2P48379 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx2P48379 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx2P48379 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Rfx2P48379 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx2P48379 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx2P48379 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx2P48379 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx2P48379 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx2P48379 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx2P48379 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx2P48379 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx2P48379 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx2P48379 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx2P48379 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.73□□□□□ -0.05
Rfx2P48379 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
Rfx2P48379 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx2P48379 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx2P48379 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx2P48379 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx2P48379 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx2P48379 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx2P48379 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx2P48379 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx2P48379 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.73□□□□□ -0.05
Rfx2P48379 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx2P48379 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx2P48379 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx2P48379 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.73□□□□□ -0.05
Rfx2P48379 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx2P48379 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.73□□□□□ -0.05
Rfx2P48379 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.73□□□□□ -0.05
Rfx2P48379 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Rfx2P48379 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Rfx2P48379 Gm29667-201ENSMUST00000190817 490 ntBASIC14.73□□□□□ -0.05
Rfx2P48379 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx2P48379 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx2P48379 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx2P48379 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx2P48379 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx2P48379 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx2P48379 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.73□□□□□ -0.05
Rfx2P48379 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx2P48379 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx2P48379 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.73□□□□□ -0.05
Rfx2P48379 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx2P48379 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx2P48379 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx2P48379 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx2P48379 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx2P48379 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx2P48379 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx2P48379 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx2P48379 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.72□□□□□ -0.05
Rfx2P48379 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.72□□□□□ -0.05
Rfx2P48379 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx2P48379 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.72□□□□□ -0.05
Rfx2P48379 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.72□□□□□ -0.05
Rfx2P48379 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx2P48379 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.72□□□□□ -0.05
Rfx2P48379 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Rfx2P48379 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx2P48379 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.72□□□□□ -0.05
Rfx2P48379 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.72□□□□□ -0.05
Rfx2P48379 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx2P48379 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx2P48379 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx2P48379 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx2P48379 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx2P48379 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx2P48379 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx2P48379 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.71□□□□□ -0.05
Rfx2P48379 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx2P48379 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx2P48379 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx2P48379 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx2P48379 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx2P48379 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.71□□□□□ -0.05
Rfx2P48379 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx2P48379 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx2P48379 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms