Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-6P43688 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nkx2-6P43688 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-6P43688 Gm15806-201ENSMUST00000120696 955 ntBASIC13.29□□□□□ -0.28
Nkx2-6P43688 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.29□□□□□ -0.28
Nkx2-6P43688 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-6P43688 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.29□□□□□ -0.28
Nkx2-6P43688 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.29□□□□□ -0.28
Nkx2-6P43688 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-6P43688 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-6P43688 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-6P43688 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.29□□□□□ -0.28
Nkx2-6P43688 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-6P43688 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-6P43688 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-6P43688 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-6P43688 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-6P43688 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-6P43688 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-6P43688 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-6P43688 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-6P43688 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-6P43688 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-6P43688 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Nkx2-6P43688 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-6P43688 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-6P43688 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-6P43688 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-6P43688 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nkx2-6P43688 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-6P43688 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.28□□□□□ -0.28
Nkx2-6P43688 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Gm14127-201ENSMUST00000117906 678 ntBASIC13.28□□□□□ -0.28
Nkx2-6P43688 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Gm11918-201ENSMUST00000121660 179 ntBASIC13.28□□□□□ -0.28
Nkx2-6P43688 Gm9002-201ENSMUST00000178437 499 ntBASIC13.28□□□□□ -0.28
Nkx2-6P43688 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Gm27701-201ENSMUST00000184498 110 ntBASIC13.28□□□□□ -0.28
Nkx2-6P43688 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.28□□□□□ -0.28
Nkx2-6P43688 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.28□□□□□ -0.28
Nkx2-6P43688 Gm5279-201ENSMUST00000199575 745 ntBASIC13.28□□□□□ -0.28
Nkx2-6P43688 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-6P43688 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-6P43688 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Nkx2-6P43688 Carlr-201ENSMUST00000181515 2574 ntBASIC13.27□□□□□ -0.28
Nkx2-6P43688 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Nkx2-6P43688 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Nkx2-6P43688 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-6P43688 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Nkx2-6P43688 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-6P43688 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.27□□□□□ -0.28
Nkx2-6P43688 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-6P43688 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-6P43688 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-6P43688 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-6P43688 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-6P43688 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-6P43688 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.27□□□□□ -0.29
Nkx2-6P43688 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.27□□□□□ -0.29
Nkx2-6P43688 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-6P43688 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-6P43688 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-6P43688 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-6P43688 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-6P43688 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms