Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Sox6P40645 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Sox6P40645 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Sox6P40645 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox6P40645 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox6P40645 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox6P40645 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox6P40645 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Sox6P40645 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox6P40645 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.21□□□□□ -0.29
Sox6P40645 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox6P40645 Rpph1-201ENSMUST00000175096 319 ntBASIC13.21□□□□□ -0.29
Sox6P40645 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.21□□□□□ -0.29
Sox6P40645 Gm37935-201ENSMUST00000192012 982 ntBASIC13.21□□□□□ -0.29
Sox6P40645 Gm2756-201ENSMUST00000195851 400 ntBASIC13.21□□□□□ -0.29
Sox6P40645 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox6P40645 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.21□□□□□ -0.29
Sox6P40645 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox6P40645 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Sox6P40645 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox6P40645 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox6P40645 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Sox6P40645 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.21□□□□□ -0.29
Sox6P40645 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox6P40645 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox6P40645 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox6P40645 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Sox6P40645 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox6P40645 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox6P40645 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox6P40645 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox6P40645 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Sox6P40645 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox6P40645 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.21□□□□□ -0.3
Sox6P40645 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.21□□□□□ -0.3
Sox6P40645 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox6P40645 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox6P40645 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.21□□□□□ -0.3
Sox6P40645 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox6P40645 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox6P40645 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Sox6P40645 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox6P40645 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.2□□□□□ -0.3
Sox6P40645 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox6P40645 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox6P40645 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox6P40645 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
Sox6P40645 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
Sox6P40645 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sox6P40645 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox6P40645 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
Sox6P40645 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox6P40645 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox6P40645 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Sox6P40645 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.2□□□□□ -0.3
Sox6P40645 Gm25911-201ENSMUST00000157621 56 ntBASIC13.2□□□□□ -0.3
Sox6P40645 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.2□□□□□ -0.3
Sox6P40645 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.2□□□□□ -0.3
Sox6P40645 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox6P40645 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox6P40645 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox6P40645 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.2□□□□□ -0.3
Sox6P40645 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox6P40645 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.2□□□□□ -0.3
Sox6P40645 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox6P40645 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox6P40645 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox6P40645 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sox6P40645 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox6P40645 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox6P40645 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox6P40645 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Sox6P40645 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox6P40645 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox6P40645 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox6P40645 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.2□□□□□ -0.3
Sox6P40645 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox6P40645 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Sox6P40645 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.19□□□□□ -0.3
Sox6P40645 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.19□□□□□ -0.3
Sox6P40645 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.19□□□□□ -0.3
Sox6P40645 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.19□□□□□ -0.3
Sox6P40645 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox6P40645 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms