Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh4P39038 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh4P39038 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cdh4P39038 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh4P39038 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh4P39038 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh4P39038 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.47□□□□□ -0.25
Cdh4P39038 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh4P39038 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Cdh4P39038 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh4P39038 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh4P39038 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh4P39038 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh4P39038 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cdh4P39038 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cdh4P39038 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh4P39038 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh4P39038 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Cdh4P39038 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Cdh4P39038 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh4P39038 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh4P39038 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh4P39038 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cdh4P39038 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh4P39038 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh4P39038 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.46□□□□□ -0.25
Cdh4P39038 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh4P39038 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cdh4P39038 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh4P39038 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh4P39038 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh4P39038 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh4P39038 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh4P39038 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cdh4P39038 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cdh4P39038 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh4P39038 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh4P39038 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh4P39038 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh4P39038 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh4P39038 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh4P39038 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cdh4P39038 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Cdh4P39038 Gm3436-201ENSMUST00000179930 840 ntBASIC13.46□□□□□ -0.25
Cdh4P39038 Gm27989-201ENSMUST00000184721 107 ntBASIC13.46□□□□□ -0.25
Cdh4P39038 Gm7775-201ENSMUST00000218871 853 ntBASIC13.46□□□□□ -0.25
Cdh4P39038 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh4P39038 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh4P39038 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh4P39038 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh4P39038 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh4P39038 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Cdh4P39038 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.46□□□□□ -0.26
Cdh4P39038 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdh4P39038 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cdh4P39038 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdh4P39038 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdh4P39038 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdh4P39038 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdh4P39038 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.46□□□□□ -0.26
Cdh4P39038 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cdh4P39038 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdh4P39038 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Cdh4P39038 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cdh4P39038 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh4P39038 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh4P39038 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh4P39038 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh4P39038 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.45□□□□□ -0.26
Cdh4P39038 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh4P39038 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh4P39038 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cdh4P39038 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh4P39038 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh4P39038 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh4P39038 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh4P39038 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh4P39038 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.45□□□□□ -0.26
Cdh4P39038 Mir8102-201ENSMUST00000184148 139 ntBASIC13.45□□□□□ -0.26
Cdh4P39038 Gm33320-201ENSMUST00000192232 530 ntBASIC13.45□□□□□ -0.26
Cdh4P39038 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.45□□□□□ -0.26
Cdh4P39038 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh4P39038 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh4P39038 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh4P39038 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh4P39038 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh4P39038 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cdh4P39038 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cdh4P39038 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh4P39038 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh4P39038 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.45□□□□□ -0.26
Cdh4P39038 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.45□□□□□ -0.26
Cdh4P39038 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdh4P39038 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdh4P39038 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdh4P39038 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdh4P39038 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cdh4P39038 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdh4P39038 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdh4P39038 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms