Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Thbs1P35441 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thbs1P35441 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.01□□□□□ -0.33
Thbs1P35441 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thbs1P35441 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Thbs1P35441 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thbs1P35441 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thbs1P35441 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.01□□□□□ -0.33
Thbs1P35441 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.01□□□□□ -0.33
Thbs1P35441 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Thbs1P35441 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Thbs1P35441 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thbs1P35441 Gm5566-201ENSMUST00000116118 459 ntBASIC13.01□□□□□ -0.33
Thbs1P35441 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Thbs1P35441 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Thbs1P35441 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Thbs1P35441 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.01□□□□□ -0.33
Thbs1P35441 Gm7063-201ENSMUST00000186840 981 ntBASIC13.01□□□□□ -0.33
Thbs1P35441 Gm37319-201ENSMUST00000193500 636 ntBASIC13.01□□□□□ -0.33
Thbs1P35441 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Thbs1P35441 Gm44335-201ENSMUST00000196879 141 ntBASIC13.01□□□□□ -0.33
Thbs1P35441 Gm44297-201ENSMUST00000198304 141 ntBASIC13.01□□□□□ -0.33
Thbs1P35441 Gm44346-201ENSMUST00000198851 141 ntBASIC13.01□□□□□ -0.33
Thbs1P35441 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Thbs1P35441 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Thbs1P35441 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thbs1P35441 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thbs1P35441 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thbs1P35441 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Thbs1P35441 Mir125a-201ENSMUST00000083545 68 ntBASIC13.01□□□□□ -0.33
Thbs1P35441 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Thbs1P35441 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Thbs1P35441 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Thbs1P35441 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Thbs1P35441 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thbs1P35441 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thbs1P35441 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thbs1P35441 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thbs1P35441 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thbs1P35441 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thbs1P35441 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Thbs1P35441 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Thbs1P35441 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thbs1P35441 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thbs1P35441 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thbs1P35441 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thbs1P35441 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Thbs1P35441 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Thbs1P35441 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Thbs1P35441 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thbs1P35441 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Thbs1P35441 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Thbs1P35441 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13□□□□□ -0.33
Thbs1P35441 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13□□□□□ -0.33
Thbs1P35441 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Thbs1P35441 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13□□□□□ -0.33
Thbs1P35441 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13□□□□□ -0.33
Thbs1P35441 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13□□□□□ -0.33
Thbs1P35441 Gm9719-201ENSMUST00000162765 543 ntBASIC13□□□□□ -0.33
Thbs1P35441 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13□□□□□ -0.33
Thbs1P35441 Gm18766-201ENSMUST00000189811 808 ntBASIC13□□□□□ -0.33
Thbs1P35441 Gm29541-201ENSMUST00000191351 678 ntBASIC13□□□□□ -0.33
Thbs1P35441 Gm43474-201ENSMUST00000196415 774 ntBASIC13□□□□□ -0.33
Thbs1P35441 AC153961.1-201ENSMUST00000217760 385 ntBASIC13□□□□□ -0.33
Thbs1P35441 Gm6991-201ENSMUST00000218475 1178 ntBASIC13□□□□□ -0.33
Thbs1P35441 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13□□□□□ -0.33
Thbs1P35441 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thbs1P35441 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13□□□□□ -0.33
Thbs1P35441 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Thbs1P35441 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13□□□□□ -0.33
Thbs1P35441 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Thbs1P35441 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13□□□□□ -0.33
Thbs1P35441 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thbs1P35441 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13□□□□□ -0.33
Thbs1P35441 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
Thbs1P35441 Gm42872-201ENSMUST00000200026 1967 ntBASIC13□□□□□ -0.33
Thbs1P35441 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thbs1P35441 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thbs1P35441 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thbs1P35441 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs1P35441 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs1P35441 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs1P35441 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs1P35441 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs1P35441 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs1P35441 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs1P35441 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Thbs1P35441 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs1P35441 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs1P35441 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs1P35441 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs1P35441 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.99□□□□□ -0.33
Thbs1P35441 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs1P35441 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.99□□□□□ -0.33
Thbs1P35441 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs1P35441 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs1P35441 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thbs1P35441 Gm12106-201ENSMUST00000116006 1200 ntBASIC12.99□□□□□ -0.33
Thbs1P35441 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.99□□□□□ -0.33
Thbs1P35441 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms