Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.98□□□□□ -0.17
Nckap1P28660 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nckap1P28660 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nckap1P28660 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nckap1P28660 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nckap1P28660 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.98□□□□□ -0.17
Nckap1P28660 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nckap1P28660 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.98□□□□□ -0.17
Nckap1P28660 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nckap1P28660 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.98□□□□□ -0.17
Nckap1P28660 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nckap1P28660 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nckap1P28660 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.98□□□□□ -0.17
Nckap1P28660 Gm37714-201ENSMUST00000194742 342 ntBASIC13.98□□□□□ -0.17
Nckap1P28660 Gm5279-201ENSMUST00000199575 745 ntBASIC13.98□□□□□ -0.17
Nckap1P28660 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nckap1P28660 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.98□□□□□ -0.17
Nckap1P28660 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nckap1P28660 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nckap1P28660 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nckap1P28660 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nckap1P28660 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nckap1P28660 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Nckap1P28660 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nckap1P28660 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nckap1P28660 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nckap1P28660 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nckap1P28660 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nckap1P28660 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nckap1P28660 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nckap1P28660 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nckap1P28660 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nckap1P28660 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nckap1P28660 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nckap1P28660 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nckap1P28660 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nckap1P28660 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nckap1P28660 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Nckap1P28660 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.97□□□□□ -0.17
Nckap1P28660 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nckap1P28660 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.97□□□□□ -0.17
Nckap1P28660 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Nckap1P28660 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nckap1P28660 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Nckap1P28660 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nckap1P28660 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nckap1P28660 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nckap1P28660 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Nckap1P28660 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.97□□□□□ -0.17
Nckap1P28660 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nckap1P28660 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nckap1P28660 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nckap1P28660 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nckap1P28660 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Nckap1P28660 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nckap1P28660 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nckap1P28660 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nckap1P28660 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nckap1P28660 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nckap1P28660 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nckap1P28660 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nckap1P28660 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Nckap1P28660 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nckap1P28660 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.96□□□□□ -0.17
Nckap1P28660 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nckap1P28660 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nckap1P28660 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.96□□□□□ -0.17
Nckap1P28660 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.96□□□□□ -0.17
Nckap1P28660 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nckap1P28660 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nckap1P28660 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nckap1P28660 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Nckap1P28660 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nckap1P28660 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nckap1P28660 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nckap1P28660 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Nckap1P28660 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.96□□□□□ -0.17
Nckap1P28660 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nckap1P28660 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Nckap1P28660 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Nckap1P28660 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nckap1P28660 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nckap1P28660 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nckap1P28660 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nckap1P28660 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nckap1P28660 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.96□□□□□ -0.18
Nckap1P28660 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nckap1P28660 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nckap1P28660 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nckap1P28660 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nckap1P28660 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nckap1P28660 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nckap1P28660 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nckap1P28660 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nckap1P28660 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nckap1P28660 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nckap1P28660 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.95□□□□□ -0.18
Nckap1P28660 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nckap1P28660 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.95□□□□□ -0.18
Nckap1P28660 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms