Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40P27512 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40P27512 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40P27512 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cd40P27512 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.71□□□□□ -0.37
Cd40P27512 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40P27512 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40P27512 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40P27512 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40P27512 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40P27512 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40P27512 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40P27512 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cd40P27512 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40P27512 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40P27512 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40P27512 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40P27512 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40P27512 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40P27512 Gm4804-201ENSMUST00000182234 999 ntBASIC12.71□□□□□ -0.37
Cd40P27512 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.71□□□□□ -0.37
Cd40P27512 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40P27512 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.71□□□□□ -0.37
Cd40P27512 Gm5425-201ENSMUST00000214125 459 ntBASIC12.71□□□□□ -0.37
Cd40P27512 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.71□□□□□ -0.37
Cd40P27512 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Cd40P27512 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40P27512 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40P27512 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Cd40P27512 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40P27512 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40P27512 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40P27512 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40P27512 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40P27512 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Cd40P27512 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Cd40P27512 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cd40P27512 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Cd40P27512 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cd40P27512 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cd40P27512 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cd40P27512 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.71□□□□□ -0.38
Cd40P27512 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cd40P27512 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cd40P27512 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cd40P27512 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40P27512 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40P27512 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40P27512 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40P27512 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cd40P27512 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40P27512 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cd40P27512 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40P27512 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.7□□□□□ -0.38
Cd40P27512 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40P27512 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.7□□□□□ -0.38
Cd40P27512 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40P27512 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.7□□□□□ -0.38
Cd40P27512 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40P27512 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40P27512 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40P27512 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cd40P27512 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Cd40P27512 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40P27512 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Cd40P27512 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.7□□□□□ -0.38
Cd40P27512 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.7□□□□□ -0.38
Cd40P27512 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40P27512 Gm2445-201ENSMUST00000182798 989 ntBASIC12.7□□□□□ -0.38
Cd40P27512 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cd40P27512 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40P27512 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40P27512 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cd40P27512 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cd40P27512 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40P27512 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Cd40P27512 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40P27512 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40P27512 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40P27512 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40P27512 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Cd40P27512 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40P27512 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40P27512 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cd40P27512 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40P27512 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40P27512 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40P27512 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40P27512 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40P27512 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40P27512 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40P27512 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.69□□□□□ -0.38
Cd40P27512 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40P27512 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.69□□□□□ -0.38
Cd40P27512 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40P27512 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40P27512 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Cd40P27512 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40P27512 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cd40P27512 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms