Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cbx3P23198 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.8□□□□□ -0.36
Cbx3P23198 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cbx3P23198 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cbx3P23198 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cbx3P23198 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cbx3P23198 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cbx3P23198 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cbx3P23198 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cbx3P23198 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cbx3P23198 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cbx3P23198 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cbx3P23198 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.79□□□□□ -0.36
Cbx3P23198 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cbx3P23198 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.79□□□□□ -0.36
Cbx3P23198 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cbx3P23198 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.79□□□□□ -0.36
Cbx3P23198 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cbx3P23198 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cbx3P23198 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cbx3P23198 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cbx3P23198 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cbx3P23198 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cbx3P23198 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cbx3P23198 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cbx3P23198 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cbx3P23198 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.79□□□□□ -0.36
Cbx3P23198 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Cbx3P23198 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cbx3P23198 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cbx3P23198 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cbx3P23198 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Cbx3P23198 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cbx3P23198 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cbx3P23198 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cbx3P23198 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cbx3P23198 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cbx3P23198 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cbx3P23198 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cbx3P23198 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cbx3P23198 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.79□□□□□ -0.36
Cbx3P23198 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cbx3P23198 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cbx3P23198 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cbx3P23198 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cbx3P23198 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cbx3P23198 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cbx3P23198 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cbx3P23198 Map1b-203ENSMUST00000223725 2669 ntBASIC12.78□□□□□ -0.36
Cbx3P23198 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.78□□□□□ -0.36
Cbx3P23198 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cbx3P23198 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cbx3P23198 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cbx3P23198 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cbx3P23198 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cbx3P23198 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Cbx3P23198 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cbx3P23198 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.78□□□□□ -0.36
Cbx3P23198 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cbx3P23198 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.78□□□□□ -0.36
Cbx3P23198 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cbx3P23198 Gm44454-201ENSMUST00000198541 138 ntBASIC12.78□□□□□ -0.36
Cbx3P23198 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.78□□□□□ -0.36
Cbx3P23198 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cbx3P23198 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cbx3P23198 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cbx3P23198 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cbx3P23198 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cbx3P23198 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cbx3P23198 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cbx3P23198 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cbx3P23198 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cbx3P23198 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cbx3P23198 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cbx3P23198 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cbx3P23198 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cbx3P23198 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cbx3P23198 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cbx3P23198 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Cbx3P23198 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cbx3P23198 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cbx3P23198 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cbx3P23198 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cbx3P23198 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cbx3P23198 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cbx3P23198 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cbx3P23198 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cbx3P23198 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cbx3P23198 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cbx3P23198 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cbx3P23198 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.77□□□□□ -0.36
Cbx3P23198 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cbx3P23198 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cbx3P23198 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cbx3P23198 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.77□□□□□ -0.37
Cbx3P23198 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cbx3P23198 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.77□□□□□ -0.37
Cbx3P23198 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.77□□□□□ -0.37
Cbx3P23198 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.77□□□□□ -0.37
Cbx3P23198 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms