Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ApoeP08226 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
ApoeP08226 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ApoeP08226 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.31□□□□□ -0.28
ApoeP08226 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.31□□□□□ -0.28
ApoeP08226 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ApoeP08226 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ApoeP08226 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ApoeP08226 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ApoeP08226 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ApoeP08226 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ApoeP08226 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
ApoeP08226 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
ApoeP08226 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.31□□□□□ -0.28
ApoeP08226 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
ApoeP08226 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ApoeP08226 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ApoeP08226 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
ApoeP08226 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
ApoeP08226 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ApoeP08226 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ApoeP08226 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ApoeP08226 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.3□□□□□ -0.28
ApoeP08226 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ApoeP08226 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ApoeP08226 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ApoeP08226 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ApoeP08226 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.3□□□□□ -0.28
ApoeP08226 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ApoeP08226 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ApoeP08226 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ApoeP08226 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.3□□□□□ -0.28
ApoeP08226 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.3□□□□□ -0.28
ApoeP08226 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.3□□□□□ -0.28
ApoeP08226 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
ApoeP08226 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
ApoeP08226 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ApoeP08226 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ApoeP08226 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ApoeP08226 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
ApoeP08226 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ApoeP08226 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ApoeP08226 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ApoeP08226 Gm13597-201ENSMUST00000121239 375 ntBASIC13.3□□□□□ -0.28
ApoeP08226 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.3□□□□□ -0.28
ApoeP08226 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ApoeP08226 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.3□□□□□ -0.28
ApoeP08226 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.3□□□□□ -0.28
ApoeP08226 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.3□□□□□ -0.28
ApoeP08226 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ApoeP08226 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ApoeP08226 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ApoeP08226 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
ApoeP08226 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ApoeP08226 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ApoeP08226 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.3□□□□□ -0.28
ApoeP08226 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ApoeP08226 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ApoeP08226 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ApoeP08226 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ApoeP08226 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ApoeP08226 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.3□□□□□ -0.28
ApoeP08226 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ApoeP08226 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
ApoeP08226 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ApoeP08226 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ApoeP08226 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ApoeP08226 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ApoeP08226 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ApoeP08226 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
ApoeP08226 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
ApoeP08226 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ApoeP08226 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ApoeP08226 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.29□□□□□ -0.28
ApoeP08226 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.29□□□□□ -0.28
ApoeP08226 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ApoeP08226 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ApoeP08226 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ApoeP08226 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
ApoeP08226 Gm12882-201ENSMUST00000121696 517 ntBASIC13.29□□□□□ -0.28
ApoeP08226 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ApoeP08226 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ApoeP08226 Gm28033-201ENSMUST00000184224 96 ntBASIC13.29□□□□□ -0.28
ApoeP08226 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ApoeP08226 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ApoeP08226 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.29□□□□□ -0.28
ApoeP08226 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ApoeP08226 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ApoeP08226 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ApoeP08226 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ApoeP08226 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.29□□□□□ -0.28
ApoeP08226 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ApoeP08226 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ApoeP08226 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
ApoeP08226 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ApoeP08226 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
ApoeP08226 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ApoeP08226 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.29□□□□□ -0.28
ApoeP08226 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ApoeP08226 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms