Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa4P06798 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa4P06798 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa4P06798 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa4P06798 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa4P06798 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa4P06798 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa4P06798 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa4P06798 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa4P06798 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Hoxa4P06798 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa4P06798 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
Hoxa4P06798 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa4P06798 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.8□□□□□ -0.2
Hoxa4P06798 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa4P06798 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa4P06798 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa4P06798 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa4P06798 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa4P06798 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Hoxa4P06798 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa4P06798 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.8□□□□□ -0.2
Hoxa4P06798 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa4P06798 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa4P06798 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa4P06798 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.8□□□□□ -0.2
Hoxa4P06798 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa4P06798 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa4P06798 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa4P06798 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa4P06798 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa4P06798 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa4P06798 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa4P06798 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Hoxa4P06798 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa4P06798 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa4P06798 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa4P06798 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa4P06798 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa4P06798 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa4P06798 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Hoxa4P06798 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa4P06798 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.79□□□□□ -0.2
Hoxa4P06798 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.79□□□□□ -0.2
Hoxa4P06798 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa4P06798 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa4P06798 Gm27772-201ENSMUST00000184900 187 ntBASIC13.79□□□□□ -0.2
Hoxa4P06798 Gm28760-201ENSMUST00000185995 736 ntBASIC13.79□□□□□ -0.2
Hoxa4P06798 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa4P06798 Gm17795-201ENSMUST00000214505 757 ntBASIC13.79□□□□□ -0.2
Hoxa4P06798 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.79□□□□□ -0.2
Hoxa4P06798 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.79□□□□□ -0.2
Hoxa4P06798 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa4P06798 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Hoxa4P06798 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.79□□□□□ -0.2
Hoxa4P06798 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.79□□□□□ -0.2
Hoxa4P06798 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa4P06798 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.79□□□□□ -0.2
Hoxa4P06798 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.79□□□□□ -0.2
Hoxa4P06798 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa4P06798 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa4P06798 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa4P06798 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa4P06798 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa4P06798 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa4P06798 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.79□□□□□ -0.2
Hoxa4P06798 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa4P06798 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa4P06798 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa4P06798 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa4P06798 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa4P06798 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa4P06798 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa4P06798 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa4P06798 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa4P06798 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Hoxa4P06798 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa4P06798 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa4P06798 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa4P06798 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa4P06798 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa4P06798 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa4P06798 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa4P06798 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Hoxa4P06798 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa4P06798 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.78□□□□□ -0.2
Hoxa4P06798 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
Hoxa4P06798 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.78□□□□□ -0.2
Hoxa4P06798 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Hoxa4P06798 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa4P06798 Gm5866-201ENSMUST00000177881 973 ntBASIC13.78□□□□□ -0.2
Hoxa4P06798 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Hoxa4P06798 Gm7063-201ENSMUST00000186840 981 ntBASIC13.78□□□□□ -0.2
Hoxa4P06798 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.78□□□□□ -0.2
Hoxa4P06798 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.78□□□□□ -0.2
Hoxa4P06798 Gm42612-201ENSMUST00000197986 623 ntBASIC13.78□□□□□ -0.2
Hoxa4P06798 Gm43170-201ENSMUST00000199827 612 ntBASIC13.78□□□□□ -0.2
Hoxa4P06798 Gm44855-201ENSMUST00000205725 362 ntBASIC13.78□□□□□ -0.2
Hoxa4P06798 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.78□□□□□ -0.2
Hoxa4P06798 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms