Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.16■□□□□ 0.02
Vti1aO89116 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vti1aO89116 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.16■□□□□ 0.02
Vti1aO89116 Gm6916-202ENSMUST00000205523 195 ntBASIC15.16■□□□□ 0.02
Vti1aO89116 Gm45059-201ENSMUST00000205558 1077 ntBASIC15.16■□□□□ 0.02
Vti1aO89116 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.16■□□□□ 0.02
Vti1aO89116 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.16■□□□□ 0.02
Vti1aO89116 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vti1aO89116 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Vti1aO89116 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vti1aO89116 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Vti1aO89116 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Vti1aO89116 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Vti1aO89116 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vti1aO89116 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Vti1aO89116 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vti1aO89116 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vti1aO89116 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Vti1aO89116 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vti1aO89116 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.15■□□□□ 0.02
Vti1aO89116 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vti1aO89116 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.15■□□□□ 0.02
Vti1aO89116 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vti1aO89116 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vti1aO89116 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vti1aO89116 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vti1aO89116 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vti1aO89116 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Vti1aO89116 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Vti1aO89116 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vti1aO89116 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vti1aO89116 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Vti1aO89116 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vti1aO89116 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vti1aO89116 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Vti1aO89116 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.15■□□□□ 0.02
Vti1aO89116 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vti1aO89116 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.15■□□□□ 0.02
Vti1aO89116 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.15■□□□□ 0.02
Vti1aO89116 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.15■□□□□ 0.02
Vti1aO89116 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.15■□□□□ 0.02
Vti1aO89116 Gm33320-201ENSMUST00000192232 530 ntBASIC15.15■□□□□ 0.02
Vti1aO89116 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.15■□□□□ 0.02
Vti1aO89116 Gm10766-202ENSMUST00000194123 606 ntBASIC15.15■□□□□ 0.02
Vti1aO89116 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.15■□□□□ 0.02
Vti1aO89116 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vti1aO89116 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Vti1aO89116 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vti1aO89116 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vti1aO89116 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Vti1aO89116 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vti1aO89116 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vti1aO89116 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vti1aO89116 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.14■□□□□ 0.01
Vti1aO89116 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Vti1aO89116 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vti1aO89116 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vti1aO89116 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vti1aO89116 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vti1aO89116 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.14■□□□□ 0.01
Vti1aO89116 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vti1aO89116 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
Vti1aO89116 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Vti1aO89116 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vti1aO89116 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vti1aO89116 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Vti1aO89116 Mir6392-201ENSMUST00000184924 108 ntBASIC15.14■□□□□ 0.01
Vti1aO89116 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Vti1aO89116 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vti1aO89116 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vti1aO89116 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vti1aO89116 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vti1aO89116 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vti1aO89116 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.14■□□□□ 0.01
Vti1aO89116 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vti1aO89116 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vti1aO89116 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vti1aO89116 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Vti1aO89116 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Vti1aO89116 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vti1aO89116 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vti1aO89116 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vti1aO89116 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vti1aO89116 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vti1aO89116 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vti1aO89116 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Vti1aO89116 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Vti1aO89116 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vti1aO89116 Gm22189-201ENSMUST00000103822 86 ntBASIC15.13■□□□□ 0.01
Vti1aO89116 Gm6912-201ENSMUST00000117218 544 ntBASIC15.13■□□□□ 0.01
Vti1aO89116 Gm15393-201ENSMUST00000120499 219 ntBASIC15.13■□□□□ 0.01
Vti1aO89116 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vti1aO89116 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.13■□□□□ 0.01
Vti1aO89116 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Vti1aO89116 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vti1aO89116 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vti1aO89116 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.13■□□□□ 0.01
Vti1aO89116 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Vti1aO89116 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.13■□□□□ 0.01
Vti1aO89116 AC130829.1-201ENSMUST00000221548 494 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms