Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Apaf1O88879 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Apaf1O88879 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Apaf1O88879 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC18.24■□□□□ 0.51
Apaf1O88879 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC18.24■□□□□ 0.51
Apaf1O88879 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC18.24■□□□□ 0.51
Apaf1O88879 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC18.24■□□□□ 0.51
Apaf1O88879 Ighv1-51-201ENSMUST00000192903 354 ntBASIC18.24■□□□□ 0.51
Apaf1O88879 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC18.24■□□□□ 0.51
Apaf1O88879 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Apaf1O88879 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Apaf1O88879 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Apaf1O88879 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Apaf1O88879 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Apaf1O88879 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Apaf1O88879 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Apaf1O88879 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Apaf1O88879 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Apaf1O88879 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Apaf1O88879 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Apaf1O88879 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC18.24■□□□□ 0.51
Apaf1O88879 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Apaf1O88879 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Apaf1O88879 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Apaf1O88879 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Apaf1O88879 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Apaf1O88879 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Apaf1O88879 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Apaf1O88879 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Apaf1O88879 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Apaf1O88879 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
Apaf1O88879 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Apaf1O88879 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC18.23■□□□□ 0.51
Apaf1O88879 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Apaf1O88879 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC18.23■□□□□ 0.51
Apaf1O88879 AC139580.1-202ENSMUST00000223574 928 ntBASIC18.23■□□□□ 0.51
Apaf1O88879 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC18.23■□□□□ 0.51
Apaf1O88879 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Apaf1O88879 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC18.23■□□□□ 0.51
Apaf1O88879 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Apaf1O88879 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Apaf1O88879 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Apaf1O88879 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Apaf1O88879 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Apaf1O88879 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Apaf1O88879 Gm28182-201ENSMUST00000188354 2477 ntBASIC18.23■□□□□ 0.51
Apaf1O88879 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Apaf1O88879 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Apaf1O88879 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Apaf1O88879 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Apaf1O88879 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Apaf1O88879 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Apaf1O88879 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC18.22■□□□□ 0.51
Apaf1O88879 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Apaf1O88879 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Apaf1O88879 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Apaf1O88879 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Apaf1O88879 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Apaf1O88879 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Apaf1O88879 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC18.22■□□□□ 0.51
Apaf1O88879 Gm13385-201ENSMUST00000121089 220 ntBASIC18.22■□□□□ 0.51
Apaf1O88879 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Apaf1O88879 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Apaf1O88879 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Apaf1O88879 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Apaf1O88879 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC18.22■□□□□ 0.51
Apaf1O88879 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC18.22■□□□□ 0.51
Apaf1O88879 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Apaf1O88879 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Apaf1O88879 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Apaf1O88879 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Apaf1O88879 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Apaf1O88879 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Apaf1O88879 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Apaf1O88879 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Apaf1O88879 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Apaf1O88879 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Apaf1O88879 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Apaf1O88879 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Apaf1O88879 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Apaf1O88879 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Apaf1O88879 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Apaf1O88879 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC18.21■□□□□ 0.51
Apaf1O88879 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Apaf1O88879 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC18.21■□□□□ 0.51
Apaf1O88879 Gm17795-201ENSMUST00000214505 757 ntBASIC18.21■□□□□ 0.51
Apaf1O88879 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC18.21■□□□□ 0.51
Apaf1O88879 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC18.21■□□□□ 0.51
Apaf1O88879 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Apaf1O88879 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Apaf1O88879 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Apaf1O88879 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Apaf1O88879 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Apaf1O88879 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Apaf1O88879 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Apaf1O88879 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Apaf1O88879 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Apaf1O88879 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.5
Apaf1O88879 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Apaf1O88879 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms