Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Lmx1bO88609 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Lmx1bO88609 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lmx1bO88609 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Lmx1bO88609 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lmx1bO88609 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Lmx1bO88609 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lmx1bO88609 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lmx1bO88609 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lmx1bO88609 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lmx1bO88609 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lmx1bO88609 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Lmx1bO88609 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lmx1bO88609 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Lmx1bO88609 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lmx1bO88609 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Lmx1bO88609 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lmx1bO88609 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lmx1bO88609 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lmx1bO88609 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Lmx1bO88609 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lmx1bO88609 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lmx1bO88609 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.74□□□□□ -0.37
Lmx1bO88609 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.74□□□□□ -0.37
Lmx1bO88609 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.74□□□□□ -0.37
Lmx1bO88609 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.74□□□□□ -0.37
Lmx1bO88609 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lmx1bO88609 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lmx1bO88609 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lmx1bO88609 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lmx1bO88609 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.74□□□□□ -0.37
Lmx1bO88609 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lmx1bO88609 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lmx1bO88609 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lmx1bO88609 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lmx1bO88609 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lmx1bO88609 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.74□□□□□ -0.37
Lmx1bO88609 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lmx1bO88609 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lmx1bO88609 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lmx1bO88609 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lmx1bO88609 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lmx1bO88609 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lmx1bO88609 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lmx1bO88609 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lmx1bO88609 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lmx1bO88609 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lmx1bO88609 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lmx1bO88609 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lmx1bO88609 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lmx1bO88609 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lmx1bO88609 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lmx1bO88609 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lmx1bO88609 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.73□□□□□ -0.37
Lmx1bO88609 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lmx1bO88609 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lmx1bO88609 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
Lmx1bO88609 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lmx1bO88609 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lmx1bO88609 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lmx1bO88609 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lmx1bO88609 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lmx1bO88609 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lmx1bO88609 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lmx1bO88609 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lmx1bO88609 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lmx1bO88609 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.73□□□□□ -0.37
Lmx1bO88609 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lmx1bO88609 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.73□□□□□ -0.37
Lmx1bO88609 Gm42612-201ENSMUST00000197986 623 ntBASIC12.73□□□□□ -0.37
Lmx1bO88609 Gm43170-201ENSMUST00000199827 612 ntBASIC12.73□□□□□ -0.37
Lmx1bO88609 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.73□□□□□ -0.37
Lmx1bO88609 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.73□□□□□ -0.37
Lmx1bO88609 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.73□□□□□ -0.37
Lmx1bO88609 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.73□□□□□ -0.37
Lmx1bO88609 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lmx1bO88609 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lmx1bO88609 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.73□□□□□ -0.37
Lmx1bO88609 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lmx1bO88609 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Lmx1bO88609 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lmx1bO88609 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lmx1bO88609 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Lmx1bO88609 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.72□□□□□ -0.37
Lmx1bO88609 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmx1bO88609 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmx1bO88609 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.72□□□□□ -0.37
Lmx1bO88609 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmx1bO88609 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmx1bO88609 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmx1bO88609 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lmx1bO88609 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmx1bO88609 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmx1bO88609 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.72□□□□□ -0.37
Lmx1bO88609 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmx1bO88609 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lmx1bO88609 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Lmx1bO88609 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmx1bO88609 Gm14928-201ENSMUST00000120198 477 ntBASIC12.72□□□□□ -0.37
Lmx1bO88609 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms