Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 AC153962.4-201ENSMUST00000217878 242 ntBASIC17.09■□□□□ 0.33
Cops6O88545 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC17.09■□□□□ 0.33
Cops6O88545 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cops6O88545 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops6O88545 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops6O88545 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops6O88545 Gm13859-201ENSMUST00000119936 1423 ntBASIC17.09■□□□□ 0.33
Cops6O88545 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cops6O88545 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops6O88545 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cops6O88545 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cops6O88545 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops6O88545 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops6O88545 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cops6O88545 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops6O88545 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops6O88545 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops6O88545 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Cops6O88545 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops6O88545 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops6O88545 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops6O88545 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cops6O88545 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cops6O88545 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cops6O88545 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC17.08■□□□□ 0.32
Cops6O88545 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cops6O88545 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cops6O88545 Mir1982-201ENSMUST00000157368 74 ntBASIC17.08■□□□□ 0.32
Cops6O88545 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cops6O88545 Gm5276-201ENSMUST00000196683 1047 ntBASIC17.08■□□□□ 0.32
Cops6O88545 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cops6O88545 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cops6O88545 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cops6O88545 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cops6O88545 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Cops6O88545 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cops6O88545 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cops6O88545 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cops6O88545 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cops6O88545 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cops6O88545 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.08■□□□□ 0.32
Cops6O88545 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cops6O88545 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cops6O88545 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cops6O88545 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cops6O88545 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cops6O88545 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cops6O88545 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cops6O88545 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC17.07■□□□□ 0.32
Cops6O88545 Gm8652-201ENSMUST00000181363 964 ntBASIC17.07■□□□□ 0.32
Cops6O88545 Gm27486-201ENSMUST00000184923 80 ntBASIC17.07■□□□□ 0.32
Cops6O88545 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cops6O88545 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC17.07■□□□□ 0.32
Cops6O88545 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cops6O88545 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cops6O88545 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cops6O88545 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cops6O88545 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cops6O88545 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cops6O88545 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cops6O88545 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cops6O88545 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cops6O88545 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cops6O88545 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cops6O88545 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cops6O88545 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cops6O88545 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC17.06■□□□□ 0.32
Cops6O88545 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cops6O88545 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC17.06■□□□□ 0.32
Cops6O88545 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cops6O88545 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cops6O88545 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cops6O88545 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
Cops6O88545 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cops6O88545 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Cops6O88545 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cops6O88545 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cops6O88545 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC17.06■□□□□ 0.32
Cops6O88545 AY702102-202ENSMUST00000194651 1173 ntBASIC17.06■□□□□ 0.32
Cops6O88545 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cops6O88545 Gm6983-201ENSMUST00000214912 628 ntBASIC17.06■□□□□ 0.32
Cops6O88545 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cops6O88545 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cops6O88545 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cops6O88545 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cops6O88545 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cops6O88545 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC17.06■□□□□ 0.32
Cops6O88545 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cops6O88545 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cops6O88545 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cops6O88545 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cops6O88545 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Cops6O88545 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cops6O88545 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cops6O88545 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.05■□□□□ 0.32
Cops6O88545 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.05■□□□□ 0.32
Cops6O88545 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cops6O88545 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cops6O88545 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cops6O88545 Mup-ps23-201ENSMUST00000118063 630 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms