Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.16□□□□□ -0.14
Dnmt3aO88508 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3aO88508 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Dnmt3aO88508 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3aO88508 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Gm12882-201ENSMUST00000121696 517 ntBASIC14.15□□□□□ -0.14
Dnmt3aO88508 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.15□□□□□ -0.14
Dnmt3aO88508 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.15□□□□□ -0.14
Dnmt3aO88508 Gm16476-201ENSMUST00000221544 139 ntBASIC14.15□□□□□ -0.14
Dnmt3aO88508 Gm6888-201ENSMUST00000221983 706 ntBASIC14.15□□□□□ -0.14
Dnmt3aO88508 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC14.15□□□□□ -0.14
Dnmt3aO88508 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Dnmt3aO88508 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3aO88508 BC001981-202ENSMUST00000191393 1545 ntBASIC14.15□□□□□ -0.14
Dnmt3aO88508 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3aO88508 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.15□□□□□ -0.15
Dnmt3aO88508 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Dnmt3aO88508 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dnmt3aO88508 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.14□□□□□ -0.15
Dnmt3aO88508 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Dnmt3aO88508 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Gm13223-201ENSMUST00000118609 747 ntBASIC14.14□□□□□ -0.15
Dnmt3aO88508 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.14□□□□□ -0.15
Dnmt3aO88508 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dnmt3aO88508 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Mir125a-201ENSMUST00000083545 68 ntBASIC14.14□□□□□ -0.15
Dnmt3aO88508 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dnmt3aO88508 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.14□□□□□ -0.15
Dnmt3aO88508 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dnmt3aO88508 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.13□□□□□ -0.15
Dnmt3aO88508 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.13□□□□□ -0.15
Dnmt3aO88508 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
Dnmt3aO88508 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Dnmt3aO88508 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Dnmt3aO88508 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Dnmt3aO88508 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Dnmt3aO88508 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Dnmt3aO88508 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Dnmt3aO88508 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.13□□□□□ -0.15
Dnmt3aO88508 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms