Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Smarce1O54941 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarce1O54941 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarce1O54941 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarce1O54941 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarce1O54941 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarce1O54941 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Smarce1O54941 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarce1O54941 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.69■□□□□ 0.26
Smarce1O54941 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smarce1O54941 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.69■□□□□ 0.26
Smarce1O54941 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smarce1O54941 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.69■□□□□ 0.26
Smarce1O54941 Gm38225-201ENSMUST00000194001 393 ntBASIC16.69■□□□□ 0.26
Smarce1O54941 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.69■□□□□ 0.26
Smarce1O54941 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarce1O54941 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarce1O54941 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smarce1O54941 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarce1O54941 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.69■□□□□ 0.26
Smarce1O54941 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Smarce1O54941 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Smarce1O54941 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarce1O54941 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Smarce1O54941 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarce1O54941 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarce1O54941 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smarce1O54941 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarce1O54941 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarce1O54941 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarce1O54941 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarce1O54941 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarce1O54941 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarce1O54941 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.69■□□□□ 0.26
Smarce1O54941 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.69■□□□□ 0.26
Smarce1O54941 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smarce1O54941 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarce1O54941 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smarce1O54941 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Smarce1O54941 Gm5639-201ENSMUST00000122305 2403 ntBASIC16.68■□□□□ 0.26
Smarce1O54941 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smarce1O54941 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarce1O54941 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarce1O54941 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smarce1O54941 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.68■□□□□ 0.26
Smarce1O54941 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smarce1O54941 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Smarce1O54941 Gm29310-201ENSMUST00000185468 696 ntBASIC16.68■□□□□ 0.26
Smarce1O54941 Gm21825-201ENSMUST00000185728 696 ntBASIC16.68■□□□□ 0.26
Smarce1O54941 Gm29109-201ENSMUST00000185895 696 ntBASIC16.68■□□□□ 0.26
Smarce1O54941 Gm21896-201ENSMUST00000186520 696 ntBASIC16.68■□□□□ 0.26
Smarce1O54941 Gm21873-201ENSMUST00000186728 696 ntBASIC16.68■□□□□ 0.26
Smarce1O54941 Gm21794-201ENSMUST00000187056 696 ntBASIC16.68■□□□□ 0.26
Smarce1O54941 Gm21880-201ENSMUST00000187275 696 ntBASIC16.68■□□□□ 0.26
Smarce1O54941 Gm21826-201ENSMUST00000187451 696 ntBASIC16.68■□□□□ 0.26
Smarce1O54941 Gm21198-201ENSMUST00000188393 696 ntBASIC16.68■□□□□ 0.26
Smarce1O54941 Gm21749-201ENSMUST00000189343 696 ntBASIC16.68■□□□□ 0.26
Smarce1O54941 Gm21901-201ENSMUST00000189568 696 ntBASIC16.68■□□□□ 0.26
Smarce1O54941 Gm29424-201ENSMUST00000189716 696 ntBASIC16.68■□□□□ 0.26
Smarce1O54941 Gm28599-201ENSMUST00000189838 694 ntBASIC16.68■□□□□ 0.26
Smarce1O54941 Gm21867-201ENSMUST00000189917 696 ntBASIC16.68■□□□□ 0.26
Smarce1O54941 Gm29269-201ENSMUST00000190087 696 ntBASIC16.68■□□□□ 0.26
Smarce1O54941 Gm21722-201ENSMUST00000190153 696 ntBASIC16.68■□□□□ 0.26
Smarce1O54941 Gm28423-201ENSMUST00000190701 696 ntBASIC16.68■□□□□ 0.26
Smarce1O54941 Gm21899-201ENSMUST00000190745 696 ntBASIC16.68■□□□□ 0.26
Smarce1O54941 Gm21910-201ENSMUST00000191163 696 ntBASIC16.68■□□□□ 0.26
Smarce1O54941 Gm21849-201ENSMUST00000191571 696 ntBASIC16.68■□□□□ 0.26
Smarce1O54941 Gm28678-201ENSMUST00000191593 696 ntBASIC16.68■□□□□ 0.26
Smarce1O54941 Gm20910-201ENSMUST00000193268 696 ntBASIC16.68■□□□□ 0.26
Smarce1O54941 Gm21871-201ENSMUST00000194621 696 ntBASIC16.68■□□□□ 0.26
Smarce1O54941 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smarce1O54941 Gm45612-201ENSMUST00000211320 160 ntBASIC16.68■□□□□ 0.26
Smarce1O54941 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Smarce1O54941 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.68■□□□□ 0.26
Smarce1O54941 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarce1O54941 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarce1O54941 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarce1O54941 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarce1O54941 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarce1O54941 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarce1O54941 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.67■□□□□ 0.26
Smarce1O54941 AA619741-201ENSMUST00000195095 646 ntBASIC16.67■□□□□ 0.26
Smarce1O54941 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.67■□□□□ 0.26
Smarce1O54941 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarce1O54941 AC158529.1-201ENSMUST00000223618 239 ntBASIC16.67■□□□□ 0.26
Smarce1O54941 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Smarce1O54941 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarce1O54941 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Smarce1O54941 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarce1O54941 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Smarce1O54941 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarce1O54941 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarce1O54941 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarce1O54941 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Smarce1O54941 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarce1O54941 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.66■□□□□ 0.26
Smarce1O54941 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.66■□□□□ 0.26
Smarce1O54941 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarce1O54941 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarce1O54941 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms