Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChkaO54804 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChkaO54804 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.2□□□□□ -0.14
ChkaO54804 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChkaO54804 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChkaO54804 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChkaO54804 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChkaO54804 BC001981-202ENSMUST00000191393 1545 ntBASIC14.2□□□□□ -0.14
ChkaO54804 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChkaO54804 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChkaO54804 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ChkaO54804 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ChkaO54804 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChkaO54804 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ChkaO54804 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ChkaO54804 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChkaO54804 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChkaO54804 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.19□□□□□ -0.14
ChkaO54804 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChkaO54804 Gm13823-201ENSMUST00000119930 345 ntBASIC14.19□□□□□ -0.14
ChkaO54804 Gm6222-201ENSMUST00000120787 396 ntBASIC14.19□□□□□ -0.14
ChkaO54804 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.19□□□□□ -0.14
ChkaO54804 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChkaO54804 Gm18889-201ENSMUST00000174284 929 ntBASIC14.19□□□□□ -0.14
ChkaO54804 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.19□□□□□ -0.14
ChkaO54804 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.19□□□□□ -0.14
ChkaO54804 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.19□□□□□ -0.14
ChkaO54804 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.19□□□□□ -0.14
ChkaO54804 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.19□□□□□ -0.14
ChkaO54804 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChkaO54804 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChkaO54804 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
ChkaO54804 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChkaO54804 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChkaO54804 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
ChkaO54804 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChkaO54804 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChkaO54804 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChkaO54804 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.19□□□□□ -0.14
ChkaO54804 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChkaO54804 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChkaO54804 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChkaO54804 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChkaO54804 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ChkaO54804 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChkaO54804 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.19□□□□□ -0.14
ChkaO54804 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChkaO54804 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ChkaO54804 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ChkaO54804 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ChkaO54804 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ChkaO54804 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ChkaO54804 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ChkaO54804 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ChkaO54804 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ChkaO54804 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ChkaO54804 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.18□□□□□ -0.14
ChkaO54804 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ChkaO54804 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.18□□□□□ -0.14
ChkaO54804 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ChkaO54804 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ChkaO54804 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ChkaO54804 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ChkaO54804 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
ChkaO54804 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ChkaO54804 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
ChkaO54804 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.18□□□□□ -0.14
ChkaO54804 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ChkaO54804 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.18□□□□□ -0.14
ChkaO54804 Gm27494-201ENSMUST00000184735 189 ntBASIC14.18□□□□□ -0.14
ChkaO54804 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.18□□□□□ -0.14
ChkaO54804 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.18□□□□□ -0.14
ChkaO54804 Gm44608-201ENSMUST00000206827 855 ntBASIC14.18□□□□□ -0.14
ChkaO54804 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.18□□□□□ -0.14
ChkaO54804 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.18□□□□□ -0.14
ChkaO54804 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.18□□□□□ -0.14
ChkaO54804 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.18□□□□□ -0.14
ChkaO54804 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ChkaO54804 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
ChkaO54804 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ChkaO54804 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.18□□□□□ -0.14
ChkaO54804 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ChkaO54804 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ChkaO54804 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ChkaO54804 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ChkaO54804 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ChkaO54804 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ChkaO54804 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ChkaO54804 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ChkaO54804 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ChkaO54804 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ChkaO54804 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ChkaO54804 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ChkaO54804 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ChkaO54804 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ChkaO54804 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.17□□□□□ -0.14
ChkaO54804 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ChkaO54804 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ChkaO54804 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ChkaO54804 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms