Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Limk2O54785 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Limk2O54785 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Limk2O54785 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Limk2O54785 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Limk2O54785 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Limk2O54785 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Limk2O54785 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Limk2O54785 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Limk2O54785 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Limk2O54785 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Limk2O54785 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Limk2O54785 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Limk2O54785 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Limk2O54785 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Limk2O54785 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Limk2O54785 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.26□□□□□ -0.13
Limk2O54785 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Limk2O54785 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Limk2O54785 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.26□□□□□ -0.13
Limk2O54785 Gm12859-201ENSMUST00000117834 427 ntBASIC14.26□□□□□ -0.13
Limk2O54785 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.26□□□□□ -0.13
Limk2O54785 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.26□□□□□ -0.13
Limk2O54785 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Limk2O54785 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.26□□□□□ -0.13
Limk2O54785 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Limk2O54785 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Limk2O54785 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.26□□□□□ -0.13
Limk2O54785 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Limk2O54785 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Limk2O54785 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Limk2O54785 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.26□□□□□ -0.13
Limk2O54785 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.26□□□□□ -0.13
Limk2O54785 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Limk2O54785 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Limk2O54785 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Limk2O54785 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Limk2O54785 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Limk2O54785 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Limk2O54785 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Limk2O54785 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Limk2O54785 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.26□□□□□ -0.13
Limk2O54785 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Limk2O54785 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Limk2O54785 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Limk2O54785 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.26□□□□□ -0.13
Limk2O54785 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.26□□□□□ -0.13
Limk2O54785 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Limk2O54785 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Limk2O54785 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Limk2O54785 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Limk2O54785 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Limk2O54785 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Limk2O54785 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Limk2O54785 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Limk2O54785 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Limk2O54785 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Limk2O54785 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Limk2O54785 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Limk2O54785 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Limk2O54785 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Limk2O54785 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Limk2O54785 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Limk2O54785 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Limk2O54785 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Limk2O54785 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.25□□□□□ -0.13
Limk2O54785 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.25□□□□□ -0.13
Limk2O54785 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.25□□□□□ -0.13
Limk2O54785 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Limk2O54785 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Limk2O54785 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Limk2O54785 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.25□□□□□ -0.13
Limk2O54785 Gm18187-201ENSMUST00000196476 984 ntBASIC14.25□□□□□ -0.13
Limk2O54785 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.25□□□□□ -0.13
Limk2O54785 Gm46209-201ENSMUST00000217912 553 ntBASIC14.25□□□□□ -0.13
Limk2O54785 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.25□□□□□ -0.13
Limk2O54785 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Limk2O54785 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Limk2O54785 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Limk2O54785 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Limk2O54785 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Limk2O54785 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Limk2O54785 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Limk2O54785 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Limk2O54785 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Limk2O54785 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Limk2O54785 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Limk2O54785 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Limk2O54785 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Limk2O54785 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.24□□□□□ -0.13
Limk2O54785 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Limk2O54785 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Limk2O54785 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Limk2O54785 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Limk2O54785 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Limk2O54785 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.24□□□□□ -0.13
Limk2O54785 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Limk2O54785 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Limk2O54785 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
Limk2O54785 Gm14928-201ENSMUST00000120198 477 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms