Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.46□□□□□ -0.09
Sdc4O35988 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.46□□□□□ -0.09
Sdc4O35988 Gm45668-201ENSMUST00000211271 493 ntBASIC14.46□□□□□ -0.09
Sdc4O35988 Gm17795-201ENSMUST00000214505 757 ntBASIC14.46□□□□□ -0.09
Sdc4O35988 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.46□□□□□ -0.09
Sdc4O35988 Gm18624-201ENSMUST00000220966 658 ntBASIC14.46□□□□□ -0.09
Sdc4O35988 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sdc4O35988 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sdc4O35988 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Sdc4O35988 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.46□□□□□ -0.09
Sdc4O35988 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.46□□□□□ -0.09
Sdc4O35988 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Sdc4O35988 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sdc4O35988 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sdc4O35988 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Sdc4O35988 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sdc4O35988 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.1
Sdc4O35988 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sdc4O35988 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sdc4O35988 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc4O35988 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc4O35988 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc4O35988 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Sdc4O35988 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc4O35988 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc4O35988 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Sdc4O35988 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Sdc4O35988 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc4O35988 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc4O35988 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Sdc4O35988 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.45□□□□□ -0.1
Sdc4O35988 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc4O35988 Gm5354-201ENSMUST00000182417 973 ntBASIC14.45□□□□□ -0.1
Sdc4O35988 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.45□□□□□ -0.1
Sdc4O35988 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc4O35988 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc4O35988 Gm7653-201ENSMUST00000214567 508 ntBASIC14.45□□□□□ -0.1
Sdc4O35988 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.45□□□□□ -0.1
Sdc4O35988 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc4O35988 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc4O35988 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc4O35988 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc4O35988 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc4O35988 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Sdc4O35988 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc4O35988 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.45□□□□□ -0.1
Sdc4O35988 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc4O35988 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc4O35988 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Sdc4O35988 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc4O35988 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc4O35988 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc4O35988 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc4O35988 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc4O35988 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc4O35988 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Sdc4O35988 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc4O35988 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc4O35988 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.44□□□□□ -0.1
Sdc4O35988 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc4O35988 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.44□□□□□ -0.1
Sdc4O35988 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.44□□□□□ -0.1
Sdc4O35988 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.44□□□□□ -0.1
Sdc4O35988 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc4O35988 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Sdc4O35988 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc4O35988 Gm6180-201ENSMUST00000065243 498 ntBASIC14.44□□□□□ -0.1
Sdc4O35988 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc4O35988 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc4O35988 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Sdc4O35988 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc4O35988 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc4O35988 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
Sdc4O35988 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc4O35988 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc4O35988 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc4O35988 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Sdc4O35988 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sdc4O35988 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sdc4O35988 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sdc4O35988 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sdc4O35988 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.43□□□□□ -0.1
Sdc4O35988 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.43□□□□□ -0.1
Sdc4O35988 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sdc4O35988 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Sdc4O35988 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sdc4O35988 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sdc4O35988 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sdc4O35988 Mir6392-201ENSMUST00000184924 108 ntBASIC14.43□□□□□ -0.1
Sdc4O35988 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Sdc4O35988 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sdc4O35988 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.43□□□□□ -0.1
Sdc4O35988 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.43□□□□□ -0.1
Sdc4O35988 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.43□□□□□ -0.1
Sdc4O35988 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sdc4O35988 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sdc4O35988 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sdc4O35988 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Sdc4O35988 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sdc4O35988 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms