Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cx3cl1O35188 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cx3cl1O35188 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cx3cl1O35188 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cx3cl1O35188 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cx3cl1O35188 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cx3cl1O35188 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cx3cl1O35188 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cx3cl1O35188 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Gm15957-201ENSMUST00000118893 974 ntBASIC13.23□□□□□ -0.29
Cx3cl1O35188 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Gm27306-201ENSMUST00000183970 107 ntBASIC13.23□□□□□ -0.29
Cx3cl1O35188 Mir7023-201ENSMUST00000185093 64 ntBASIC13.23□□□□□ -0.29
Cx3cl1O35188 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Cx3cl1O35188 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.22□□□□□ -0.29
Cx3cl1O35188 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Gm10576-201ENSMUST00000191927 825 ntBASIC13.22□□□□□ -0.29
Cx3cl1O35188 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cx3cl1O35188 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.22□□□□□ -0.29
Cx3cl1O35188 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cl1O35188 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cl1O35188 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cl1O35188 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.21□□□□□ -0.29
Cx3cl1O35188 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cl1O35188 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cl1O35188 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cl1O35188 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Cx3cl1O35188 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cl1O35188 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cl1O35188 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cl1O35188 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cl1O35188 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cl1O35188 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cl1O35188 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cl1O35188 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Cx3cl1O35188 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Cx3cl1O35188 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cl1O35188 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cl1O35188 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cl1O35188 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms