Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Polr1aO35134 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Polr1aO35134 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Polr1aO35134 Gm18244-201ENSMUST00000219747 1566 ntBASIC21.22■□□□□ 0.99
Polr1aO35134 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Polr1aO35134 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Polr1aO35134 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Polr1aO35134 Gm44364-201ENSMUST00000198368 141 ntBASIC21.22■□□□□ 0.99
Polr1aO35134 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Polr1aO35134 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Polr1aO35134 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Polr1aO35134 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Polr1aO35134 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Polr1aO35134 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Polr1aO35134 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Polr1aO35134 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Polr1aO35134 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Polr1aO35134 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Polr1aO35134 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Polr1aO35134 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Polr1aO35134 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Polr1aO35134 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Polr1aO35134 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Polr1aO35134 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC21.21■□□□□ 0.99
Polr1aO35134 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC21.21■□□□□ 0.99
Polr1aO35134 Gm7046-201ENSMUST00000221351 977 ntBASIC21.21■□□□□ 0.99
Polr1aO35134 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Polr1aO35134 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Polr1aO35134 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Polr1aO35134 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Polr1aO35134 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Polr1aO35134 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Polr1aO35134 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Polr1aO35134 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Polr1aO35134 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Polr1aO35134 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Polr1aO35134 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Polr1aO35134 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Polr1aO35134 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC21.2■□□□□ 0.98
Polr1aO35134 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Polr1aO35134 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC21.2■□□□□ 0.98
Polr1aO35134 Gm25261-201ENSMUST00000157416 134 ntBASIC21.2■□□□□ 0.98
Polr1aO35134 Gm4857-201ENSMUST00000192718 785 ntBASIC21.2■□□□□ 0.98
Polr1aO35134 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC21.2■□□□□ 0.98
Polr1aO35134 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Polr1aO35134 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Polr1aO35134 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC21.2■□□□□ 0.98
Polr1aO35134 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Polr1aO35134 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Polr1aO35134 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Polr1aO35134 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Polr1aO35134 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Polr1aO35134 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Polr1aO35134 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Polr1aO35134 Gm45760-201ENSMUST00000212190 1782 ntBASIC21.19■□□□□ 0.98
Polr1aO35134 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Polr1aO35134 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC21.19■□□□□ 0.98
Polr1aO35134 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Polr1aO35134 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Polr1aO35134 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Polr1aO35134 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Polr1aO35134 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Polr1aO35134 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Polr1aO35134 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC21.19■□□□□ 0.98
Polr1aO35134 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC21.19■□□□□ 0.98
Polr1aO35134 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC21.19■□□□□ 0.98
Polr1aO35134 Gm6222-202ENSMUST00000182143 629 ntBASIC21.19■□□□□ 0.98
Polr1aO35134 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC21.19■□□□□ 0.98
Polr1aO35134 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC21.19■□□□□ 0.98
Polr1aO35134 AC159747.1-201ENSMUST00000219903 265 ntBASIC21.19■□□□□ 0.98
Polr1aO35134 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Polr1aO35134 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC21.19■□□□□ 0.98
Polr1aO35134 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Polr1aO35134 AC096628.2-201ENSMUST00000225443 1413 ntBASIC21.19■□□□□ 0.98
Polr1aO35134 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
Polr1aO35134 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Polr1aO35134 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Polr1aO35134 Gm8793-201ENSMUST00000183069 1303 ntBASIC21.19■□□□□ 0.98
Polr1aO35134 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Polr1aO35134 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Polr1aO35134 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Polr1aO35134 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Polr1aO35134 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Polr1aO35134 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Polr1aO35134 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Polr1aO35134 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
Polr1aO35134 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Polr1aO35134 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Polr1aO35134 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Polr1aO35134 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Polr1aO35134 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC21.18■□□□□ 0.98
Polr1aO35134 Gm3890-201ENSMUST00000182416 207 ntBASIC21.18■□□□□ 0.98
Polr1aO35134 Gm6334-201ENSMUST00000207083 228 ntBASIC21.18■□□□□ 0.98
Polr1aO35134 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC21.18■□□□□ 0.98
Polr1aO35134 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Polr1aO35134 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Polr1aO35134 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Polr1aO35134 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Polr1aO35134 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Polr1aO35134 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms