Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf3O08791 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.62□□□□□ -0.07
Ebf3O08791 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf3O08791 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.62□□□□□ -0.07
Ebf3O08791 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf3O08791 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf3O08791 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf3O08791 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.62□□□□□ -0.07
Ebf3O08791 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Ebf3O08791 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf3O08791 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf3O08791 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Ebf3O08791 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf3O08791 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf3O08791 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf3O08791 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf3O08791 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf3O08791 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf3O08791 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf3O08791 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf3O08791 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf3O08791 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ebf3O08791 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf3O08791 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf3O08791 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf3O08791 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.61□□□□□ -0.07
Ebf3O08791 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf3O08791 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.61□□□□□ -0.07
Ebf3O08791 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
Ebf3O08791 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf3O08791 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf3O08791 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Ebf3O08791 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.61□□□□□ -0.07
Ebf3O08791 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Ebf3O08791 Gm33320-201ENSMUST00000192232 530 ntBASIC14.61□□□□□ -0.07
Ebf3O08791 Gm18624-201ENSMUST00000220966 658 ntBASIC14.61□□□□□ -0.07
Ebf3O08791 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.61□□□□□ -0.07
Ebf3O08791 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf3O08791 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf3O08791 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ebf3O08791 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf3O08791 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf3O08791 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf3O08791 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf3O08791 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf3O08791 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf3O08791 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf3O08791 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.61□□□□□ -0.07
Ebf3O08791 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf3O08791 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf3O08791 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf3O08791 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf3O08791 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf3O08791 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf3O08791 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.6□□□□□ -0.07
Ebf3O08791 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf3O08791 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf3O08791 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf3O08791 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.6□□□□□ -0.07
Ebf3O08791 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf3O08791 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf3O08791 Gm12585-201ENSMUST00000117307 290 ntBASIC14.6□□□□□ -0.07
Ebf3O08791 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.6□□□□□ -0.07
Ebf3O08791 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.6□□□□□ -0.07
Ebf3O08791 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.6□□□□□ -0.07
Ebf3O08791 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.6□□□□□ -0.07
Ebf3O08791 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf3O08791 Gm25857-201ENSMUST00000082788 129 ntBASIC14.6□□□□□ -0.07
Ebf3O08791 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Ebf3O08791 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf3O08791 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ebf3O08791 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf3O08791 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf3O08791 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf3O08791 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf3O08791 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf3O08791 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf3O08791 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf3O08791 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.59□□□□□ -0.07
Ebf3O08791 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Ebf3O08791 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf3O08791 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ebf3O08791 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ebf3O08791 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.59□□□□□ -0.07
Ebf3O08791 Gm15393-201ENSMUST00000120499 219 ntBASIC14.59□□□□□ -0.07
Ebf3O08791 Gm11918-201ENSMUST00000121660 179 ntBASIC14.59□□□□□ -0.07
Ebf3O08791 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ebf3O08791 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf3O08791 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.59□□□□□ -0.07
Ebf3O08791 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.59□□□□□ -0.07
Ebf3O08791 Gm8602-201ENSMUST00000184045 607 ntBASIC14.59□□□□□ -0.07
Ebf3O08791 Mir6392-201ENSMUST00000184924 108 ntBASIC14.59□□□□□ -0.07
Ebf3O08791 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.59□□□□□ -0.07
Ebf3O08791 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf3O08791 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.59□□□□□ -0.07
Ebf3O08791 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.59□□□□□ -0.07
Ebf3O08791 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ebf3O08791 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.59□□□□□ -0.07
Ebf3O08791 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf3O08791 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms