Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcf11G3X9Z4 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Pcf11G3X9Z4 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcf11G3X9Z4 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcf11G3X9Z4 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcf11G3X9Z4 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcf11G3X9Z4 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Pcf11G3X9Z4 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcf11G3X9Z4 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcf11G3X9Z4 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcf11G3X9Z4 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcf11G3X9Z4 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcf11G3X9Z4 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcf11G3X9Z4 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcf11G3X9Z4 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Pcf11G3X9Z4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcf11G3X9Z4 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcf11G3X9Z4 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcf11G3X9Z4 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC20.92■□□□□ 0.94
Pcf11G3X9Z4 Gm11658-201ENSMUST00000120913 1008 ntBASIC20.92■□□□□ 0.94
Pcf11G3X9Z4 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC20.92■□□□□ 0.94
Pcf11G3X9Z4 Gm2639-201ENSMUST00000156881 1297 ntBASIC20.92■□□□□ 0.94
Pcf11G3X9Z4 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
Pcf11G3X9Z4 Gm2467-201ENSMUST00000182266 1010 ntBASIC20.92■□□□□ 0.94
Pcf11G3X9Z4 Gm6981-201ENSMUST00000182467 1008 ntBASIC20.92■□□□□ 0.94
Pcf11G3X9Z4 Gm44974-201ENSMUST00000206387 1279 ntBASIC20.92■□□□□ 0.94
Pcf11G3X9Z4 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC20.92■□□□□ 0.94
Pcf11G3X9Z4 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC20.92■□□□□ 0.94
Pcf11G3X9Z4 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC20.92■□□□□ 0.94
Pcf11G3X9Z4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcf11G3X9Z4 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Pcf11G3X9Z4 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcf11G3X9Z4 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Pcf11G3X9Z4 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcf11G3X9Z4 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcf11G3X9Z4 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcf11G3X9Z4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcf11G3X9Z4 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcf11G3X9Z4 Gm11793-201ENSMUST00000120433 981 ntBASIC20.91■□□□□ 0.94
Pcf11G3X9Z4 Gm1335-201ENSMUST00000121653 386 ntBASIC20.91■□□□□ 0.94
Pcf11G3X9Z4 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC20.91■□□□□ 0.94
Pcf11G3X9Z4 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC20.91■□□□□ 0.94
Pcf11G3X9Z4 Gm26927-201ENSMUST00000182385 965 ntBASIC20.91■□□□□ 0.94
Pcf11G3X9Z4 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Pcf11G3X9Z4 Gm45841-201ENSMUST00000207700 164 ntBASIC20.91■□□□□ 0.94
Pcf11G3X9Z4 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC20.91■□□□□ 0.94
Pcf11G3X9Z4 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcf11G3X9Z4 Nupl1-207ENSMUST00000225311 2475 ntBASIC20.91■□□□□ 0.94
Pcf11G3X9Z4 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcf11G3X9Z4 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcf11G3X9Z4 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcf11G3X9Z4 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcf11G3X9Z4 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcf11G3X9Z4 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcf11G3X9Z4 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcf11G3X9Z4 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcf11G3X9Z4 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Pcf11G3X9Z4 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcf11G3X9Z4 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Pcf11G3X9Z4 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Pcf11G3X9Z4 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC20.9■□□□□ 0.94
Pcf11G3X9Z4 Gm37497-201ENSMUST00000195830 798 ntBASIC20.9■□□□□ 0.94
Pcf11G3X9Z4 CU024892.2-201ENSMUST00000224608 832 ntBASIC20.9■□□□□ 0.94
Pcf11G3X9Z4 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcf11G3X9Z4 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcf11G3X9Z4 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcf11G3X9Z4 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcf11G3X9Z4 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcf11G3X9Z4 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcf11G3X9Z4 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC20.9■□□□□ 0.94
Pcf11G3X9Z4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Pcf11G3X9Z4 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcf11G3X9Z4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Pcf11G3X9Z4 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC20.9■□□□□ 0.94
Pcf11G3X9Z4 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcf11G3X9Z4 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Pcf11G3X9Z4 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcf11G3X9Z4 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC20.89■□□□□ 0.94
Pcf11G3X9Z4 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Pcf11G3X9Z4 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Pcf11G3X9Z4 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC20.89■□□□□ 0.94
Pcf11G3X9Z4 CT573086.1-201ENSMUST00000227202 1074 ntBASIC20.89■□□□□ 0.94
Pcf11G3X9Z4 Gm10146-201ENSMUST00000072739 309 ntBASIC20.89■□□□□ 0.94
Pcf11G3X9Z4 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Pcf11G3X9Z4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcf11G3X9Z4 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcf11G3X9Z4 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC20.89■□□□□ 0.94
Pcf11G3X9Z4 Gm14608-201ENSMUST00000120030 1553 ntBASIC20.89■□□□□ 0.94
Pcf11G3X9Z4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcf11G3X9Z4 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcf11G3X9Z4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Pcf11G3X9Z4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcf11G3X9Z4 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcf11G3X9Z4 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcf11G3X9Z4 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcf11G3X9Z4 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcf11G3X9Z4 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Pcf11G3X9Z4 Gm13369-201ENSMUST00000119442 987 ntBASIC20.89■□□□□ 0.93
Pcf11G3X9Z4 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcf11G3X9Z4 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms