Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim55G3X8Y1 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim55G3X8Y1 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Trim55G3X8Y1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim55G3X8Y1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim55G3X8Y1 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim55G3X8Y1 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trim55G3X8Y1 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.43□□□□□ -0.1
Trim55G3X8Y1 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim55G3X8Y1 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim55G3X8Y1 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim55G3X8Y1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trim55G3X8Y1 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim55G3X8Y1 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim55G3X8Y1 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trim55G3X8Y1 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim55G3X8Y1 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim55G3X8Y1 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim55G3X8Y1 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.43□□□□□ -0.1
Trim55G3X8Y1 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim55G3X8Y1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim55G3X8Y1 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trim55G3X8Y1 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14.43□□□□□ -0.1
Trim55G3X8Y1 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim55G3X8Y1 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim55G3X8Y1 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim55G3X8Y1 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim55G3X8Y1 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim55G3X8Y1 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim55G3X8Y1 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim55G3X8Y1 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim55G3X8Y1 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim55G3X8Y1 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.42□□□□□ -0.1
Trim55G3X8Y1 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trim55G3X8Y1 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim55G3X8Y1 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim55G3X8Y1 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim55G3X8Y1 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim55G3X8Y1 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim55G3X8Y1 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.42□□□□□ -0.1
Trim55G3X8Y1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim55G3X8Y1 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim55G3X8Y1 Gm29518-201ENSMUST00000190858 372 ntBASIC14.42□□□□□ -0.1
Trim55G3X8Y1 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.42□□□□□ -0.1
Trim55G3X8Y1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim55G3X8Y1 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim55G3X8Y1 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim55G3X8Y1 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim55G3X8Y1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim55G3X8Y1 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim55G3X8Y1 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Gm37722-201ENSMUST00000193757 208 ntBASIC14.41□□□□□ -0.1
Trim55G3X8Y1 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Gm45053-201ENSMUST00000206112 2499 ntBASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim55G3X8Y1 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim55G3X8Y1 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim55G3X8Y1 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.4□□□□□ -0.1
Trim55G3X8Y1 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim55G3X8Y1 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.4□□□□□ -0.1
Trim55G3X8Y1 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim55G3X8Y1 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim55G3X8Y1 Gm11355-201ENSMUST00000121120 306 ntBASIC14.4□□□□□ -0.1
Trim55G3X8Y1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim55G3X8Y1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim55G3X8Y1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.4□□□□□ -0.1
Trim55G3X8Y1 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim55G3X8Y1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim55G3X8Y1 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms