Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NpcdF8VQB8 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NpcdF8VQB8 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NpcdF8VQB8 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NpcdF8VQB8 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC16.85■□□□□ 0.29
NpcdF8VQB8 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC16.85■□□□□ 0.29
NpcdF8VQB8 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NpcdF8VQB8 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NpcdF8VQB8 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NpcdF8VQB8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NpcdF8VQB8 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NpcdF8VQB8 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.85■□□□□ 0.29
NpcdF8VQB8 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NpcdF8VQB8 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NpcdF8VQB8 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.84■□□□□ 0.29
NpcdF8VQB8 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC16.84■□□□□ 0.29
NpcdF8VQB8 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Gm13342-201ENSMUST00000121055 207 ntBASIC16.84■□□□□ 0.29
NpcdF8VQB8 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NpcdF8VQB8 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Gm45930-201ENSMUST00000221330 292 ntBASIC16.84■□□□□ 0.29
NpcdF8VQB8 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Gm9823-201ENSMUST00000051212 327 ntBASIC16.84■□□□□ 0.29
NpcdF8VQB8 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Gm7993-201ENSMUST00000200970 1384 ntBASIC16.84■□□□□ 0.29
NpcdF8VQB8 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.84■□□□□ 0.29
NpcdF8VQB8 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NpcdF8VQB8 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NpcdF8VQB8 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
NpcdF8VQB8 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NpcdF8VQB8 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NpcdF8VQB8 Mir877-201ENSMUST00000104738 85 ntBASIC16.83■□□□□ 0.28
NpcdF8VQB8 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
NpcdF8VQB8 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NpcdF8VQB8 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
NpcdF8VQB8 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC16.83■□□□□ 0.28
NpcdF8VQB8 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NpcdF8VQB8 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NpcdF8VQB8 Gm16342-201ENSMUST00000124025 1025 ntBASIC16.83■□□□□ 0.28
NpcdF8VQB8 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NpcdF8VQB8 Gm26464-201ENSMUST00000157094 305 ntBASIC16.83■□□□□ 0.28
NpcdF8VQB8 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC16.83■□□□□ 0.28
NpcdF8VQB8 Gm44397-201ENSMUST00000195950 113 ntBASIC16.83■□□□□ 0.28
NpcdF8VQB8 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
NpcdF8VQB8 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.83■□□□□ 0.28
NpcdF8VQB8 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NpcdF8VQB8 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NpcdF8VQB8 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NpcdF8VQB8 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NpcdF8VQB8 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NpcdF8VQB8 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
NpcdF8VQB8 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NpcdF8VQB8 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NpcdF8VQB8 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NpcdF8VQB8 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NpcdF8VQB8 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NpcdF8VQB8 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NpcdF8VQB8 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NpcdF8VQB8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NpcdF8VQB8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NpcdF8VQB8 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NpcdF8VQB8 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NpcdF8VQB8 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NpcdF8VQB8 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.82■□□□□ 0.28
NpcdF8VQB8 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.82■□□□□ 0.28
NpcdF8VQB8 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NpcdF8VQB8 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NpcdF8VQB8 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NpcdF8VQB8 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NpcdF8VQB8 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC16.82■□□□□ 0.28
NpcdF8VQB8 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC16.82■□□□□ 0.28
NpcdF8VQB8 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC16.82■□□□□ 0.28
NpcdF8VQB8 Gm27516-201ENSMUST00000184237 98 ntBASIC16.82■□□□□ 0.28
NpcdF8VQB8 Gm42627-201ENSMUST00000197347 224 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms