Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Gm15770-201ENSMUST00000117498 584 ntBASIC13.18□□□□□ -0.3
Colca2F8VPY8 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.18□□□□□ -0.3
Colca2F8VPY8 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.18□□□□□ -0.3
Colca2F8VPY8 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.18□□□□□ -0.3
Colca2F8VPY8 Gm18753-201ENSMUST00000201000 566 ntBASIC13.18□□□□□ -0.3
Colca2F8VPY8 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.18□□□□□ -0.3
Colca2F8VPY8 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Colca2F8VPY8 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.18□□□□□ -0.3
Colca2F8VPY8 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Colca2F8VPY8 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Colca2F8VPY8 Mir433-201ENSMUST00000093564 124 ntBASIC13.18□□□□□ -0.3
Colca2F8VPY8 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Colca2F8VPY8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Colca2F8VPY8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Colca2F8VPY8 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.18□□□□□ -0.3
Colca2F8VPY8 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Colca2F8VPY8 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Colca2F8VPY8 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Colca2F8VPY8 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.18□□□□□ -0.3
Colca2F8VPY8 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Colca2F8VPY8 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Colca2F8VPY8 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.18□□□□□ -0.3
Colca2F8VPY8 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Colca2F8VPY8 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Colca2F8VPY8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Colca2F8VPY8 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.17□□□□□ -0.3
Colca2F8VPY8 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.17□□□□□ -0.3
Colca2F8VPY8 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.17□□□□□ -0.3
Colca2F8VPY8 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.17□□□□□ -0.3
Colca2F8VPY8 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Gm12403-201ENSMUST00000121384 959 ntBASIC13.17□□□□□ -0.3
Colca2F8VPY8 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.17□□□□□ -0.3
Colca2F8VPY8 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.17□□□□□ -0.3
Colca2F8VPY8 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.17□□□□□ -0.3
Colca2F8VPY8 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.17□□□□□ -0.3
Colca2F8VPY8 Mir7070-201ENSMUST00000183657 86 ntBASIC13.17□□□□□ -0.3
Colca2F8VPY8 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Colca2F8VPY8 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.17□□□□□ -0.3
Colca2F8VPY8 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Gm16372-201ENSMUST00000073088 450 ntBASIC13.17□□□□□ -0.3
Colca2F8VPY8 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Colca2F8VPY8 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.17□□□□□ -0.3
Colca2F8VPY8 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Colca2F8VPY8 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Colca2F8VPY8 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.16□□□□□ -0.3
Colca2F8VPY8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Colca2F8VPY8 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Colca2F8VPY8 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Colca2F8VPY8 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Colca2F8VPY8 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.16□□□□□ -0.3
Colca2F8VPY8 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Colca2F8VPY8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Colca2F8VPY8 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Colca2F8VPY8 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Colca2F8VPY8 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Colca2F8VPY8 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.16□□□□□ -0.3
Colca2F8VPY8 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Colca2F8VPY8 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.16□□□□□ -0.3
Colca2F8VPY8 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Colca2F8VPY8 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Colca2F8VPY8 Gm38158-201ENSMUST00000194617 339 ntBASIC13.16□□□□□ -0.3
Colca2F8VPY8 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.16□□□□□ -0.3
Colca2F8VPY8 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Colca2F8VPY8 Gm10608-202ENSMUST00000213924 676 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms