Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a3E9PWQ3 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.71□□□□□ -0.21
Col6a3E9PWQ3 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Col6a3E9PWQ3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a3E9PWQ3 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a3E9PWQ3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Col6a3E9PWQ3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a3E9PWQ3 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.71□□□□□ -0.21
Col6a3E9PWQ3 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a3E9PWQ3 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.71□□□□□ -0.21
Col6a3E9PWQ3 AC154184.3-201ENSMUST00000225620 1090 ntBASIC13.71□□□□□ -0.21
Col6a3E9PWQ3 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Col6a3E9PWQ3 Mir483-201ENSMUST00000093631 73 ntBASIC13.71□□□□□ -0.21
Col6a3E9PWQ3 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a3E9PWQ3 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a3E9PWQ3 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a3E9PWQ3 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a3E9PWQ3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a3E9PWQ3 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a3E9PWQ3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a3E9PWQ3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a3E9PWQ3 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Col6a3E9PWQ3 Gm11531-201ENSMUST00000117614 555 ntBASIC13.71□□□□□ -0.22
Col6a3E9PWQ3 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.71□□□□□ -0.22
Col6a3E9PWQ3 Gm37028-201ENSMUST00000194276 107 ntBASIC13.71□□□□□ -0.22
Col6a3E9PWQ3 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Col6a3E9PWQ3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col6a3E9PWQ3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.71□□□□□ -0.22
Col6a3E9PWQ3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col6a3E9PWQ3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Col6a3E9PWQ3 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Gm11618-201ENSMUST00000117946 267 ntBASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Gm8492-201ENSMUST00000182375 987 ntBASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Gm15957-201ENSMUST00000118893 974 ntBASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Gm5621-201ENSMUST00000187303 640 ntBASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Gm18027-201ENSMUST00000218947 619 ntBASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Gm24749-201ENSMUST00000157838 343 ntBASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a3E9PWQ3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Gm13888-201ENSMUST00000119148 422 ntBASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Gm12036-201ENSMUST00000120008 530 ntBASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Gm12165-201ENSMUST00000117047 342 ntBASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Gm12363-201ENSMUST00000122250 668 ntBASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Gm25604-201ENSMUST00000158359 133 ntBASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Gm8712-201ENSMUST00000221090 701 ntBASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms