Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scn7aB1AYL1 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC17.75■□□□□ 0.43
Scn7aB1AYL1 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC17.75■□□□□ 0.43
Scn7aB1AYL1 CT009713.10-202ENSMUST00000225734 696 ntBASIC17.75■□□□□ 0.43
Scn7aB1AYL1 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn7aB1AYL1 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn7aB1AYL1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Scn7aB1AYL1 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn7aB1AYL1 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn7aB1AYL1 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn7aB1AYL1 Gm43423-201ENSMUST00000198390 2094 ntBASIC17.75■□□□□ 0.43
Scn7aB1AYL1 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scn7aB1AYL1 Gm3756-201ENSMUST00000169182 1355 ntBASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Gm27501-201ENSMUST00000183599 107 ntBASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Ighv1-62-201ENSMUST00000193406 350 ntBASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Gm37008-201ENSMUST00000195712 319 ntBASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Gm45880-201ENSMUST00000213041 853 ntBASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC17.74■□□□□ 0.43
Scn7aB1AYL1 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC17.74■□□□□ 0.43
Scn7aB1AYL1 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC17.74■□□□□ 0.43
Scn7aB1AYL1 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn7aB1AYL1 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scn7aB1AYL1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Scn7aB1AYL1 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn7aB1AYL1 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC17.73■□□□□ 0.43
Scn7aB1AYL1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Scn7aB1AYL1 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn7aB1AYL1 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scn7aB1AYL1 Gm38049-201ENSMUST00000195698 1372 ntBASIC17.73■□□□□ 0.43
Scn7aB1AYL1 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC17.73■□□□□ 0.43
Scn7aB1AYL1 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Scn7aB1AYL1 Gm42872-201ENSMUST00000200026 1967 ntBASIC17.73■□□□□ 0.43
Scn7aB1AYL1 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scn7aB1AYL1 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn7aB1AYL1 Gm7809-201ENSMUST00000153199 742 ntBASIC17.73■□□□□ 0.43
Scn7aB1AYL1 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC17.73■□□□□ 0.43
Scn7aB1AYL1 Gm7899-201ENSMUST00000192935 1897 ntBASIC17.73■□□□□ 0.43
Scn7aB1AYL1 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scn7aB1AYL1 AC154171.1-201ENSMUST00000224610 643 ntBASIC17.73■□□□□ 0.43
Scn7aB1AYL1 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn7aB1AYL1 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn7aB1AYL1 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Scn7aB1AYL1 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Scn7aB1AYL1 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scn7aB1AYL1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Scn7aB1AYL1 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
Scn7aB1AYL1 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn7aB1AYL1 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Scn7aB1AYL1 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scn7aB1AYL1 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC17.72■□□□□ 0.43
Scn7aB1AYL1 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Scn7aB1AYL1 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Scn7aB1AYL1 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scn7aB1AYL1 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC17.72■□□□□ 0.43
Scn7aB1AYL1 Gm37042-201ENSMUST00000193816 581 ntBASIC17.72■□□□□ 0.43
Scn7aB1AYL1 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC17.72■□□□□ 0.43
Scn7aB1AYL1 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn7aB1AYL1 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn7aB1AYL1 Gm10268-201ENSMUST00000085340 555 ntBASIC17.72■□□□□ 0.43
Scn7aB1AYL1 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn7aB1AYL1 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn7aB1AYL1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn7aB1AYL1 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn7aB1AYL1 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Scn7aB1AYL1 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scn7aB1AYL1 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.72■□□□□ 0.43
Scn7aB1AYL1 Gm18244-201ENSMUST00000219747 1566 ntBASIC17.72■□□□□ 0.43
Scn7aB1AYL1 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn7aB1AYL1 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC17.71■□□□□ 0.43
Scn7aB1AYL1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn7aB1AYL1 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn7aB1AYL1 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn7aB1AYL1 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms