Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Gm7222-201ENSMUST00000117512 906 ntBASIC11.37□□□□□ -0.59
Gm12887B1AVM1 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Gm7284-201ENSMUST00000131667 944 ntBASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 AC121577.1-201ENSMUST00000227302 707 ntBASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm12887B1AVM1 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Gm45167-201ENSMUST00000208007 322 ntBASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 AC154471.1-201ENSMUST00000224418 436 ntBASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Spcs1-207ENSMUST00000228767 1008 ntBASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm12887B1AVM1 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.35□□□□□ -0.59
Gm12887B1AVM1 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms