Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lnp1A0A1B0GSK3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.71□□□□□ -0.53
Lnp1A0A1B0GSK3 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lnp1A0A1B0GSK3 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lnp1A0A1B0GSK3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lnp1A0A1B0GSK3 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lnp1A0A1B0GSK3 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lnp1A0A1B0GSK3 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lnp1A0A1B0GSK3 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lnp1A0A1B0GSK3 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lnp1A0A1B0GSK3 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lnp1A0A1B0GSK3 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lnp1A0A1B0GSK3 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lnp1A0A1B0GSK3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lnp1A0A1B0GSK3 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lnp1A0A1B0GSK3 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Lnp1A0A1B0GSK3 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.71□□□□□ -0.54
Lnp1A0A1B0GSK3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lnp1A0A1B0GSK3 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm10253-201ENSMUST00000194270 940 ntBASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.7□□□□□ -0.54
Lnp1A0A1B0GSK3 Acot6-202ENSMUST00000222921 3622 ntBASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm6415-201ENSMUST00000118488 348 ntBASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm9719-201ENSMUST00000162765 543 ntBASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm25948-201ENSMUST00000175334 112 ntBASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm45453-201ENSMUST00000211758 853 ntBASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms