Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3n-3A0A0G2JEM0 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3n-3A0A0G2JEM0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC10.66□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Mir7071-201ENSMUST00000184847 69 ntBASIC10.66□□□□□ -0.7
Trav3n-3A0A0G2JEM0 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3n-3A0A0G2JEM0 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3n-3A0A0G2JEM0 CT010506.4-201ENSMUST00000225457 351 ntBASIC10.66□□□□□ -0.7
Trav3n-3A0A0G2JEM0 AC151836.1-202ENSMUST00000226259 753 ntBASIC10.66□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Gm11780-201ENSMUST00000136880 516 ntBASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Gm37153-201ENSMUST00000193637 231 ntBASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Gm9924-202ENSMUST00000192760 2311 ntBASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 AC154262.2-201ENSMUST00000224310 2293 ntBASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3n-3A0A0G2JEM0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.65□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav3n-3A0A0G2JEM0 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3n-3A0A0G2JEM0 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.64□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gm11185-201ENSMUST00000117732 1007 ntBASIC10.64□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gm17807-201ENSMUST00000186869 298 ntBASIC10.64□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gm7787-201ENSMUST00000216858 688 ntBASIC10.64□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms