Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Gm45683-201ENSMUST00000210825 1247 ntBASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Gm18041-201ENSMUST00000218210 618 ntBASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 AC159295.1-201ENSMUST00000225326 940 ntBASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Gm5639-201ENSMUST00000122305 2403 ntBASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 CT025610.1-201ENSMUST00000224552 1786 ntBASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Gm25925-201ENSMUST00000158314 306 ntBASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Gm10275-202ENSMUST00000168697 495 ntBASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Gm10275-201ENSMUST00000092620 635 ntBASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ighv1-11A0A0A6YWI9 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Ighv1-11A0A0A6YWI9 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms