Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav5-4A0A075B652 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Gm15467-201ENSMUST00000120582 445 ntBASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Trav5-4A0A075B652 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Gm14494-201ENSMUST00000118786 435 ntBASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Gm11025-201ENSMUST00000140773 466 ntBASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Gm20553-201ENSMUST00000204205 844 ntBASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Gm44771-201ENSMUST00000206975 626 ntBASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Acot6-202ENSMUST00000222921 3622 ntBASIC11.78□□□□□ -0.52
Trav5-4A0A075B652 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav5-4A0A075B652 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.77□□□□□ -0.52
Trav5-4A0A075B652 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav5-4A0A075B652 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav5-4A0A075B652 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav5-4A0A075B652 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav5-4A0A075B652 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Trav5-4A0A075B652 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav5-4A0A075B652 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav5-4A0A075B652 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav5-4A0A075B652 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav5-4A0A075B652 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.77□□□□□ -0.52
Trav5-4A0A075B652 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 Gm11779-201ENSMUST00000118541 368 ntBASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms